Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.47■□□□□ 0.39
CMSS1Q9BQ75 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 FP700111.2-201ENST00000619190 1892 ntBASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 BX005040.4-201ENST00000637145 1518 ntBASIC17.46■□□□□ 0.39
CMSS1Q9BQ75 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.46■□□□□ 0.38
CMSS1Q9BQ75 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 TSPY26P-201ENST00000476365 1326 ntBASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.45■□□□□ 0.38
CMSS1Q9BQ75 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 PCDHAC2-203ENST00000615316 3011 ntBASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 AC099791.1-201ENST00000416440 715 ntBASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CMSS1Q9BQ75 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms