Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC27.7■■■□□ 2.02
ABCA3Q99758 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
ABCA3Q99758 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.69■■■□□ 2.02
ABCA3Q99758 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA3Q99758 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA3Q99758 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC27.69■■■□□ 2.02
ABCA3Q99758 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC27.69■■■□□ 2.02
ABCA3Q99758 DUT-205ENST00000558813 769 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA3Q99758 AF186192.3-201ENST00000583427 947 ntBASIC27.69■■■□□ 2.02
ABCA3Q99758 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA3Q99758 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA3Q99758 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA3Q99758 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
ABCA3Q99758 RPS15-203ENST00000586096 570 ntTSL 2 BASIC27.68■■■□□ 2.02
ABCA3Q99758 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.68■■■□□ 2.02
ABCA3Q99758 REXO1L10P-201ENST00000615707 1290 ntBASIC27.68■■■□□ 2.02
ABCA3Q99758 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.68■■■□□ 2.02
ABCA3Q99758 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA3Q99758 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
ABCA3Q99758 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
ABCA3Q99758 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA3Q99758 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.68■■■□□ 2.02
ABCA3Q99758 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA3Q99758 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA3Q99758 RBM17P1-201ENST00000453646 1190 ntBASIC27.67■■■□□ 2.02
ABCA3Q99758 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA3Q99758 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA3Q99758 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA3Q99758 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA3Q99758 SRI-203ENST00000419179 1307 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA3Q99758 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA3Q99758 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA3Q99758 PGM5P4-201ENST00000421970 445 ntBASIC27.67■■■□□ 2.02
ABCA3Q99758 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC27.67■■■□□ 2.02
ABCA3Q99758 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.67■■■□□ 2.02
ABCA3Q99758 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.66■■■□□ 2.02
ABCA3Q99758 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA3Q99758 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA3Q99758 AL353807.1-201ENST00000427475 662 ntBASIC27.66■■■□□ 2.02
ABCA3Q99758 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA3Q99758 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA3Q99758 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA3Q99758 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA3Q99758 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA3Q99758 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA3Q99758 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA3Q99758 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.65■■■□□ 2.02
ABCA3Q99758 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
ABCA3Q99758 AC079598.2-202ENST00000546624 1451 ntBASIC27.65■■■□□ 2.02
ABCA3Q99758 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA3Q99758 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC27.64■■■□□ 2.02
ABCA3Q99758 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.64■■■□□ 2.02
ABCA3Q99758 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
ABCA3Q99758 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA3Q99758 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA3Q99758 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
ABCA3Q99758 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.64■■■□□ 2.01
ABCA3Q99758 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC27.64■■■□□ 2.01
ABCA3Q99758 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC27.64■■■□□ 2.01
ABCA3Q99758 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
ABCA3Q99758 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
ABCA3Q99758 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
ABCA3Q99758 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
ABCA3Q99758 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.63■■■□□ 2.01
ABCA3Q99758 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ABCA3Q99758 AC127496.7-201ENST00000625110 1798 ntBASIC27.63■■■□□ 2.01
ABCA3Q99758 MMP23A-201ENST00000234610 1017 ntBASIC27.63■■■□□ 2.01
ABCA3Q99758 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC27.63■■■□□ 2.01
ABCA3Q99758 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
ABCA3Q99758 AC005521.1-201ENST00000393351 872 ntBASIC27.63■■■□□ 2.01
ABCA3Q99758 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC27.63■■■□□ 2.01
ABCA3Q99758 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC27.63■■■□□ 2.01
ABCA3Q99758 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC27.63■■■□□ 2.01
ABCA3Q99758 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
ABCA3Q99758 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
ABCA3Q99758 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC27.62■■■□□ 2.01
ABCA3Q99758 TERF1P1-201ENST00000311003 1181 ntBASIC27.62■■■□□ 2.01
ABCA3Q99758 KRT16P5-201ENST00000455284 522 ntBASIC27.62■■■□□ 2.01
ABCA3Q99758 NME3-204ENST00000563498 920 ntTSL 2 BASIC27.62■■■□□ 2.01
ABCA3Q99758 NT5C-211ENST00000582170 653 ntTSL 3 BASIC27.62■■■□□ 2.01
ABCA3Q99758 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA3Q99758 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.62■■■□□ 2.01
ABCA3Q99758 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA3Q99758 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA3Q99758 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA3Q99758 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
ABCA3Q99758 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.61■■■□□ 2.01
ABCA3Q99758 AL390955.1-201ENST00000428694 934 ntBASIC27.61■■■□□ 2.01
ABCA3Q99758 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
ABCA3Q99758 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.61■■■□□ 2.01
ABCA3Q99758 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ABCA3Q99758 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
ABCA3Q99758 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.61■■■□□ 2.01
ABCA3Q99758 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms