Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 AL391422.3-201ENST00000603791 2761 ntBASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB18PQ96TA0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHB18PQ96TA0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 PKD1P6-201ENST00000343738 4769 ntBASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 RARRES2P6-201ENST00000567333 442 ntBASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB18PQ96TA0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB18PQ96TA0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.77■■□□□ 1.07
PCDHB18PQ96TA0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHB18PQ96TA0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB18PQ96TA0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
PCDHB18PQ96TA0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 AC007322.3-201ENST00000426526 701 ntBASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB18PQ96TA0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHB18PQ96TA0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms