Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 DUX4L16-201ENST00000555130 1264 ntBASIC21.08■□□□□ 0.97
IFT43Q96FT9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 UBE2DNL-204ENST00000602536 740 ntBASIC21.08■□□□□ 0.97
IFT43Q96FT9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IFT43Q96FT9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
IFT43Q96FT9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IFT43Q96FT9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IFT43Q96FT9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.07■□□□□ 0.96
IFT43Q96FT9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
IFT43Q96FT9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFT43Q96FT9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.06■□□□□ 0.96
IFT43Q96FT9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IFT43Q96FT9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.06■□□□□ 0.96
IFT43Q96FT9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
IFT43Q96FT9 AC007322.1-201ENST00000426983 750 ntBASIC21.06■□□□□ 0.96
IFT43Q96FT9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IFT43Q96FT9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 AC245052.3-201ENST00000450182 901 ntBASIC21.05■□□□□ 0.96
IFT43Q96FT9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.05■□□□□ 0.96
IFT43Q96FT9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.05■□□□□ 0.96
IFT43Q96FT9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
IFT43Q96FT9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
IFT43Q96FT9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IFT43Q96FT9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFT43Q96FT9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
IFT43Q96FT9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.04■□□□□ 0.96
IFT43Q96FT9 SLC7A5P1-201ENST00000568957 537 ntBASIC21.04■□□□□ 0.96
IFT43Q96FT9 AL121832.2-201ENST00000610979 668 ntBASIC21.04■□□□□ 0.96
IFT43Q96FT9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IFT43Q96FT9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.04■□□□□ 0.96
IFT43Q96FT9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IFT43Q96FT9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IFT43Q96FT9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IFT43Q96FT9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.04■□□□□ 0.96
IFT43Q96FT9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
IFT43Q96FT9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFT43Q96FT9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IFT43Q96FT9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.02■□□□□ 0.96
IFT43Q96FT9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms