Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC39Q96DD0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 KRT18P20-201ENST00000548986 1279 ntBASIC20.71■□□□□ 0.91
LRRC39Q96DD0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC39Q96DD0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRRC39Q96DD0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 AL391422.3-201ENST00000603791 2761 ntBASIC20.7■□□□□ 0.9
LRRC39Q96DD0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC39Q96DD0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 AC105265.2-201ENST00000467189 838 ntBASIC20.69■□□□□ 0.9
LRRC39Q96DD0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 CCDC92B-201ENST00000575506 885 ntBASIC20.69■□□□□ 0.9
LRRC39Q96DD0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC39Q96DD0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 AC123595.1-201ENST00000440769 1046 ntBASIC20.68■□□□□ 0.9
LRRC39Q96DD0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
LRRC39Q96DD0 AC104187.1-201ENST00000607510 612 ntBASIC20.68■□□□□ 0.9
LRRC39Q96DD0 AC005837.3-201ENST00000612163 286 ntBASIC20.68■□□□□ 0.9
LRRC39Q96DD0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC39Q96DD0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC39Q96DD0 AC243732.1-201ENST00000612648 864 ntBASIC20.67■□□□□ 0.9
LRRC39Q96DD0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms