Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HPS1Q92902 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS1Q92902 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS1Q92902 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS1Q92902 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS1Q92902 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HPS1Q92902 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS1Q92902 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HPS1Q92902 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS1Q92902 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
HPS1Q92902 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 GABARAPL3-202ENST00000624044 1851 ntBASIC18.59■□□□□ 0.57
HPS1Q92902 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.59■□□□□ 0.57
HPS1Q92902 TSPY26P-201ENST00000476365 1326 ntBASIC18.59■□□□□ 0.57
HPS1Q92902 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.59■□□□□ 0.57
HPS1Q92902 AC034268.1-201ENST00000441047 882 ntBASIC18.59■□□□□ 0.57
HPS1Q92902 SLC47A1P1-202ENST00000449666 945 ntBASIC18.59■□□□□ 0.57
HPS1Q92902 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
HPS1Q92902 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.59■□□□□ 0.57
HPS1Q92902 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HPS1Q92902 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HPS1Q92902 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HPS1Q92902 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HPS1Q92902 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HPS1Q92902 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HPS1Q92902 AC004408.2-201ENST00000623613 2777 ntBASIC18.59■□□□□ 0.57
HPS1Q92902 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
HPS1Q92902 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HPS1Q92902 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
HPS1Q92902 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HPS1Q92902 YBX1P1-201ENST00000445822 960 ntBASIC18.58■□□□□ 0.56
HPS1Q92902 IGHV3-19-201ENST00000521488 291 ntBASIC18.58■□□□□ 0.56
HPS1Q92902 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.58■□□□□ 0.56
HPS1Q92902 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.58■□□□□ 0.56
HPS1Q92902 AC068587.7-201ENST00000641602 218 ntBASIC18.58■□□□□ 0.56
HPS1Q92902 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
HPS1Q92902 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
HPS1Q92902 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HPS1Q92902 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HPS1Q92902 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS1Q92902 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HPS1Q92902 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS1Q92902 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS1Q92902 AC005082.1-201ENST00000413042 2259 ntBASIC18.57■□□□□ 0.56
HPS1Q92902 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HPS1Q92902 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS1Q92902 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HPS1Q92902 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS1Q92902 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HPS1Q92902 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS1Q92902 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.56■□□□□ 0.56
HPS1Q92902 AC087239.1-201ENST00000622671 572 ntBASIC18.56■□□□□ 0.56
HPS1Q92902 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS1Q92902 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS1Q92902 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS1Q92902 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms