Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC006970.2-201ENST00000450065 779 ntBASIC20.75■□□□□ 0.91
PTCD2Q8WV60 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 AC243732.1-201ENST00000612648 864 ntBASIC20.75■□□□□ 0.91
PTCD2Q8WV60 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.75■□□□□ 0.91
PTCD2Q8WV60 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCD2Q8WV60 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PTCD2Q8WV60 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.73■□□□□ 0.91
PTCD2Q8WV60 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 AC007322.1-201ENST00000426983 750 ntBASIC20.72■□□□□ 0.91
PTCD2Q8WV60 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 LINC01006-201ENST00000333319 2292 ntBASIC20.72■□□□□ 0.91
PTCD2Q8WV60 AC116050.2-201ENST00000612102 1779 ntBASIC20.72■□□□□ 0.91
PTCD2Q8WV60 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCD2Q8WV60 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 NCF1B-203ENST00000435988 1254 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 TERF1P5-201ENST00000477545 1207 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 AC104771.1-201ENST00000603335 964 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 AC005181.1-201ENST00000604782 1256 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 AC231657.2-201ENST00000624556 255 ntBASIC20.71■□□□□ 0.91
PTCD2Q8WV60 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCD2Q8WV60 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms