Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.97■□□□□ 0.95
SHROOM3Q8TF72 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 AC092667.1-201ENST00000434301 2586 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 AL355472.2-201ENST00000422958 438 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 NCF1B-203ENST00000435988 1254 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 CROCCP5-201ENST00000436658 830 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 AF201337.1-201ENST00000520239 748 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 AC006970.2-201ENST00000450065 779 ntBASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.96■□□□□ 0.95
SHROOM3Q8TF72 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SHROOM3Q8TF72 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 CDV3P1-201ENST00000471403 739 ntBASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 LINC01006-201ENST00000333319 2292 ntBASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHROOM3Q8TF72 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.94■□□□□ 0.94
SHROOM3Q8TF72 FEM1AP1-201ENST00000431297 1995 ntBASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHROOM3Q8TF72 AC007322.1-201ENST00000426983 750 ntBASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 MIR4651-201ENST00000582622 73 ntBASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms