Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNIH3Q8TBE1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 AC239859.2-201ENST00000444165 318 ntBASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 AC092720.2-201ENST00000602388 1665 ntBASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.72■□□□□ 0.59
CNIH3Q8TBE1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.71■□□□□ 0.59
CNIH3Q8TBE1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 AC011484.1-201ENST00000377652 1995 ntBASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CNIH3Q8TBE1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.69■□□□□ 0.58
CNIH3Q8TBE1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 AC009299.2-201ENST00000482477 511 ntBASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CNIH3Q8TBE1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms