Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM58Q8NG06 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM58Q8NG06 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM58Q8NG06 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 UNC93B3-201ENST00000308076 687 ntBASIC21.73■■□□□ 1.07
TRIM58Q8NG06 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM58Q8NG06 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM58Q8NG06 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM58Q8NG06 AC024257.2-201ENST00000549699 147 ntBASIC21.71■■□□□ 1.07
TRIM58Q8NG06 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms