Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 KRT18P35-201ENST00000510488 1269 ntBASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 AC113410.3-201ENST00000623366 203 ntBASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP43Q8NDM7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 CDV3P1-201ENST00000471403 739 ntBASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CFAP43Q8NDM7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 CYP21A1P-202ENST00000354927 1481 ntBASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.35■■■□□ 2.77
CFAP43Q8NDM7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 MTDHP1-201ENST00000605323 784 ntBASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 CD177P1-201ENST00000606252 935 ntBASIC32.34■■■□□ 2.77
CFAP43Q8NDM7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP43Q8NDM7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC32.32■■■□□ 2.77
CFAP43Q8NDM7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CFAP43Q8NDM7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 TSPY15P-201ENST00000457163 923 ntBASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 TMPOP1-202ENST00000424642 1267 ntBASIC32.31■■■□□ 2.76
CFAP43Q8NDM7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
CFAP43Q8NDM7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 AC239809.2-201ENST00000415381 517 ntBASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC32.29■■■□□ 2.76
CFAP43Q8NDM7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms