Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AC091799.1-201ENST00000422823 811 ntBASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 TSPY20P-201ENST00000450910 630 ntBASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 TMEM191A-211ENST00000637163 1067 ntBASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AC013268.1-206ENST00000638368 961 ntBASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AC112229.1-201ENST00000639295 961 ntBASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.19■■□□□ 1.46
CCDC144CPQ8IYA2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC144CPQ8IYA2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 AC069152.1-201ENST00000438030 544 ntBASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 AC243732.1-201ENST00000612648 864 ntBASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC144CPQ8IYA2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 AC121338.2-201ENST00000622535 1744 ntBASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC144CPQ8IYA2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 AC098934.4-201ENST00000564127 592 ntBASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 AC068338.2-201ENST00000563278 1430 ntBASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC144CPQ8IYA2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144CPQ8IYA2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144CPQ8IYA2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC144CPQ8IYA2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144CPQ8IYA2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CCDC144CPQ8IYA2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144CPQ8IYA2 AC133041.1-202ENST00000642053 222 ntBASIC24.14■■□□□ 1.45
CCDC144CPQ8IYA2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC144CPQ8IYA2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CCDC144CPQ8IYA2 CYP2T1P-201ENST00000432607 1285 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms