Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX60Q8IY21 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX60Q8IY21 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX60Q8IY21 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX60Q8IY21 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX60Q8IY21 RPS2P4-201ENST00000476944 856 ntBASIC25.53■■□□□ 1.68
DDX60Q8IY21 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.53■■□□□ 1.68
DDX60Q8IY21 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX60Q8IY21 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.53■■□□□ 1.68
DDX60Q8IY21 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX60Q8IY21 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX60Q8IY21 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 EP400NL-214ENST00000641289 2402 ntBASIC25.52■■□□□ 1.68
DDX60Q8IY21 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.52■■□□□ 1.68
DDX60Q8IY21 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX60Q8IY21 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
DDX60Q8IY21 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
DDX60Q8IY21 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.51■■□□□ 1.68
DDX60Q8IY21 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
DDX60Q8IY21 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
DDX60Q8IY21 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.51■■□□□ 1.68
DDX60Q8IY21 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.51■■□□□ 1.68
DDX60Q8IY21 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX60Q8IY21 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX60Q8IY21 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.51■■□□□ 1.67
DDX60Q8IY21 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX60Q8IY21 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.51■■□□□ 1.67
DDX60Q8IY21 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX60Q8IY21 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX60Q8IY21 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX60Q8IY21 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 AC079834.2-201ENST00000609776 1949 ntBASIC25.49■■□□□ 1.67
DDX60Q8IY21 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX60Q8IY21 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX60Q8IY21 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX60Q8IY21 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 AC012618.2-201ENST00000428058 849 ntBASIC25.49■■□□□ 1.67
DDX60Q8IY21 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX60Q8IY21 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX60Q8IY21 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX60Q8IY21 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 C2orf69P4-201ENST00000565394 541 ntBASIC25.48■■□□□ 1.67
DDX60Q8IY21 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX60Q8IY21 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX60Q8IY21 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DDX60Q8IY21 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
DDX60Q8IY21 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms