Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SMC5Q8IY18 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.46■■□□□ 1.67
SMC5Q8IY18 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 AL391422.3-201ENST00000603791 2761 ntBASIC25.46■■□□□ 1.67
SMC5Q8IY18 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.46■■□□□ 1.67
SMC5Q8IY18 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMC5Q8IY18 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMC5Q8IY18 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
SMC5Q8IY18 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SMC5Q8IY18 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SMC5Q8IY18 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.44■■□□□ 1.66
SMC5Q8IY18 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 MIR6821-201ENST00000617625 74 ntBASIC25.44■■□□□ 1.66
SMC5Q8IY18 MYCNOS-205ENST00000641950 531 ntBASIC25.44■■□□□ 1.66
SMC5Q8IY18 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 ADM-207ENST00000530439 1839 ntTSL 2 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMC5Q8IY18 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.44■■□□□ 1.66
SMC5Q8IY18 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 AC007322.3-201ENST00000426526 701 ntBASIC25.43■■□□□ 1.66
SMC5Q8IY18 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 NTF6G-201ENST00000591094 616 ntBASIC25.43■■□□□ 1.66
SMC5Q8IY18 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.43■■□□□ 1.66
SMC5Q8IY18 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMC5Q8IY18 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SMC5Q8IY18 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMC5Q8IY18 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMC5Q8IY18 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.42■■□□□ 1.66
SMC5Q8IY18 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMC5Q8IY18 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.42■■□□□ 1.66
SMC5Q8IY18 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMC5Q8IY18 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMC5Q8IY18 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 AC034268.1-201ENST00000441047 882 ntBASIC25.41■■□□□ 1.66
SMC5Q8IY18 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMC5Q8IY18 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMC5Q8IY18 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMC5Q8IY18 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SMC5Q8IY18 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMC5Q8IY18 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms