Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN4BQ8IWT1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN4BQ8IWT1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN4BQ8IWT1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 FAM201B-201ENST00000458407 597 ntBASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN4BQ8IWT1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCN4BQ8IWT1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SCN4BQ8IWT1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCN4BQ8IWT1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SCN4BQ8IWT1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 AC079834.2-201ENST00000609776 1949 ntBASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN4BQ8IWT1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 AL049796.1-201ENST00000565336 1766 ntBASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 AC011484.1-201ENST00000377652 1995 ntBASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.63■■□□□ 1.05
SCN4BQ8IWT1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms