Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC50Q8IVM0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC50Q8IVM0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC50Q8IVM0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC50Q8IVM0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CCDC50Q8IVM0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC50Q8IVM0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 AC027702.1-201ENST00000563810 1770 ntBASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC50Q8IVM0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 AC011484.1-201ENST00000377652 1995 ntBASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC50Q8IVM0 AIRN-201ENST00000601203 4374 ntBASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 AC027612.3-201ENST00000413684 1047 ntBASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC50Q8IVM0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCDC50Q8IVM0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 AC120498.10-201ENST00000621827 505 ntBASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CCDC50Q8IVM0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 LINC02228-203ENST00000641970 1355 ntBASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC50Q8IVM0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms