Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 AC092720.2-201ENST00000602388 1665 ntBASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 IGHV3-19-201ENST00000521488 291 ntBASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 MIR4767-201ENST00000582827 78 ntBASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
NUDCD3Q8IVD9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
NUDCD3Q8IVD9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.33■□□□□ 0.84
NUDCD3Q8IVD9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 AP004607.4-201ENST00000530158 1459 ntBASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 AC131281.2-201ENST00000520478 145 ntBASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
NUDCD3Q8IVD9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUDCD3Q8IVD9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 AC105233.4-201ENST00000642045 216 ntBASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.3■□□□□ 0.84
NUDCD3Q8IVD9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 TCF3P1-201ENST00000423021 1937 ntBASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.29■□□□□ 0.84
NUDCD3Q8IVD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms