Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 FP700111.2-201ENST00000619190 1892 ntBASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD2Q8IUF1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 AC133552.2-202ENST00000575694 574 ntBASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 OR10C1-204ENST00000622521 1039 ntBASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 AC008694.1-202ENST00000636953 945 ntBASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 AL121603.2-201ENST00000557373 2117 ntBASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 AC007225.1-201ENST00000566331 1836 ntBASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.31■■□□□ 1.16
CBWD2Q8IUF1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 CYP21A1P-202ENST00000354927 1481 ntBASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CBWD2Q8IUF1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD2Q8IUF1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 AC105036.2-201ENST00000569468 176 ntBASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 MIR2861-201ENST00000636310 90 ntBASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD2Q8IUF1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 AL355472.2-201ENST00000422958 438 ntBASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 NCF1B-203ENST00000435988 1254 ntBASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 AF201337.1-201ENST00000520239 748 ntBASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 AC010980.2-201ENST00000587099 1412 ntBASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD2Q8IUF1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CBWD2Q8IUF1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms