Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
MRPL55Q7Z7F7 KRT87P-202ENST00000534226 1464 ntBASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 AL158211.5-201ENST00000623583 2518 ntBASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FEM1AP1-201ENST00000431297 1995 ntBASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 POU5F1P4-201ENST00000413175 1085 ntBASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MRPL55Q7Z7F7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 IRS3P-201ENST00000223076 1006 ntBASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 MIR6084-201ENST00000622012 110 ntBASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 BCL2-203ENST00000589955 5011 ntBASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MRPL55Q7Z7F7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 LINC01006-201ENST00000333319 2292 ntBASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 AC120498.10-201ENST00000621827 505 ntBASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MRPL55Q7Z7F7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms