Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3RF1Q7Z6J0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3RF1Q7Z6J0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.54■■□□□ 1.36
SH3RF1Q7Z6J0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 AC073648.6-201ENST00000641589 218 ntBASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SH3RF1Q7Z6J0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH3RF1Q7Z6J0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 AC026366.1-201ENST00000488803 879 ntBASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 AC008550.1-201ENST00000511500 884 ntBASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 AC053503.5-201ENST00000601508 636 ntBASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH3RF1Q7Z6J0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms