Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DENND4AQ7Z401 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.31■■□□□ 1
DENND4AQ7Z401 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.31■■□□□ 1
DENND4AQ7Z401 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.31■■□□□ 1
DENND4AQ7Z401 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.31■■□□□ 1
DENND4AQ7Z401 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DENND4AQ7Z401 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.31■■□□□ 1
DENND4AQ7Z401 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.31■■□□□ 1
DENND4AQ7Z401 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.31■■□□□ 1
DENND4AQ7Z401 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DENND4AQ7Z401 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.31■■□□□ 1
DENND4AQ7Z401 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.3■■□□□ 1
DENND4AQ7Z401 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DENND4AQ7Z401 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DENND4AQ7Z401 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.3■■□□□ 1
DENND4AQ7Z401 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.3■■□□□ 1
DENND4AQ7Z401 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.3■■□□□ 1
DENND4AQ7Z401 AP001412.1-201ENST00000608405 714 ntBASIC21.3■■□□□ 1
DENND4AQ7Z401 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.3■■□□□ 1
DENND4AQ7Z401 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DENND4AQ7Z401 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.3■■□□□ 1
DENND4AQ7Z401 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
DENND4AQ7Z401 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
DENND4AQ7Z401 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.29■■□□□ 1
DENND4AQ7Z401 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 C2orf69P4-201ENST00000565394 541 ntBASIC21.29■■□□□ 1
DENND4AQ7Z401 AC120498.8-201ENST00000614275 531 ntBASIC21.29■■□□□ 1
DENND4AQ7Z401 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.29■■□□□ 1
DENND4AQ7Z401 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.29■■□□□ 1
DENND4AQ7Z401 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DENND4AQ7Z401 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
DENND4AQ7Z401 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
DENND4AQ7Z401 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.28■■□□□ 1
DENND4AQ7Z401 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.28■■□□□ 1
DENND4AQ7Z401 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.28■■□□□ 1
DENND4AQ7Z401 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.28■■□□□ 1
DENND4AQ7Z401 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.28■■□□□ 1
DENND4AQ7Z401 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.28■■□□□ 1
DENND4AQ7Z401 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND4AQ7Z401 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
DENND4AQ7Z401 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.27■■□□□ 1
DENND4AQ7Z401 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.27■■□□□ 1
DENND4AQ7Z401 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.27■■□□□ 1
DENND4AQ7Z401 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DENND4AQ7Z401 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.27■■□□□ 1
DENND4AQ7Z401 NUDT16P1-203ENST00000513809 620 ntBASIC21.27■■□□□ 1
DENND4AQ7Z401 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.27■■□□□ 1
DENND4AQ7Z401 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.27■■□□□ 1
DENND4AQ7Z401 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.27■■□□□ 1
DENND4AQ7Z401 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DENND4AQ7Z401 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DENND4AQ7Z401 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DENND4AQ7Z401 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
DENND4AQ7Z401 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DENND4AQ7Z401 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND4AQ7Z401 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms