Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 RARRES2P4-201ENST00000514074 484 ntBASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LYSMD3Q7Z3D4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 AC069236.1-201ENST00000604339 616 ntBASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 AC092667.1-201ENST00000434301 2586 ntBASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
LYSMD3Q7Z3D4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 AC006128.1-201ENST00000624704 1661 ntBASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 AC008694.1-202ENST00000636953 945 ntBASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LYSMD3Q7Z3D4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.58■□□□□ 0.89
LYSMD3Q7Z3D4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD3Q7Z3D4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD3Q7Z3D4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD3Q7Z3D4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD3Q7Z3D4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LYSMD3Q7Z3D4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 AC093787.1-201ENST00000450396 207 ntBASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 OR10C1-204ENST00000622521 1039 ntBASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.57■□□□□ 0.88
LYSMD3Q7Z3D4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 AC133552.2-202ENST00000575694 574 ntBASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms