Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NHLRC1Q6VVB1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 LINC01521-201ENST00000504184 1943 ntBASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.4■□□□□ 0.54
NHLRC1Q6VVB1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NHLRC1Q6VVB1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NHLRC1Q6VVB1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 AC007952.6-201ENST00000573168 2673 ntBASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 AC003957.1-201ENST00000625108 2673 ntBASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NHLRC1Q6VVB1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 TERF1P5-201ENST00000477545 1207 ntBASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 MFSD11-216ENST00000590393 1141 ntBASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 AC010536.3-201ENST00000620306 533 ntBASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
NHLRC1Q6VVB1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 KRT18P11-201ENST00000435214 1283 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC137761.2-201ENST00000561729 223 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC145350.3-201ENST00000569033 163 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC022517.1-201ENST00000592429 346 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC027702.1-201ENST00000563810 1770 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
NHLRC1Q6VVB1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms