Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 PGM5P4-201ENST00000421970 445 ntBASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 AP006294.2-201ENST00000641667 209 ntBASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DCLRE1AQ6PJP8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 Z98882.1-201ENST00000622160 2253 ntBASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 AP003097.1-201ENST00000530657 1135 ntBASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 AC006058.3-201ENST00000606217 1069 ntBASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.98■■□□□ 1.11
DCLRE1AQ6PJP8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 PNMA6B-201ENST00000538162 1200 ntBASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 C2orf69P4-201ENST00000565394 541 ntBASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.97■■□□□ 1.11
DCLRE1AQ6PJP8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 AC092368.3-202ENST00000574180 1591 ntBASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 AC011484.1-201ENST00000377652 1995 ntBASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 AC128676.1-201ENST00000454392 318 ntBASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DCLRE1AQ6PJP8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
DCLRE1AQ6PJP8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
DCLRE1AQ6PJP8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DCLRE1AQ6PJP8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 AC098590.1-201ENST00000468126 897 ntBASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 AC008403.3-201ENST00000598924 454 ntBASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 AL356652.1-201ENST00000615962 565 ntBASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
DCLRE1AQ6PJP8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DCLRE1AQ6PJP8 UNC93B4-201ENST00000505679 747 ntBASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms