Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 HLA-L-209ENST00000420110 1011 ntBASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 AC083906.2-201ENST00000511578 360 ntBASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 LINC01521-201ENST00000504184 1943 ntBASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39BQ5VTQ0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 AL512625.2-201ENST00000417533 625 ntBASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 RARRES2P4-201ENST00000514074 484 ntBASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 AL109923.1-201ENST00000618799 583 ntBASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TTC39BQ5VTQ0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 AC104771.1-201ENST00000603335 964 ntBASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TTC39BQ5VTQ0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TTC39BQ5VTQ0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.33■■□□□ 1
TTC39BQ5VTQ0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 AC105036.2-201ENST00000569468 176 ntBASIC21.32■■□□□ 1
TTC39BQ5VTQ0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TTC39BQ5VTQ0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.31■■□□□ 1
TTC39BQ5VTQ0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 AC007322.3-201ENST00000426526 701 ntBASIC21.31■■□□□ 1
TTC39BQ5VTQ0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 TSPY6P-201ENST00000448518 926 ntBASIC21.31■■□□□ 1
TTC39BQ5VTQ0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 AC016405.3-201ENST00000607710 860 ntBASIC21.31■■□□□ 1
TTC39BQ5VTQ0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TTC39BQ5VTQ0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TTC39BQ5VTQ0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms