Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF1Q5TC12 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 AC087623.3-201ENST00000607047 1098 ntBASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 AC006128.1-201ENST00000624704 1661 ntBASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF1Q5TC12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 KRT87P-202ENST00000534226 1464 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L2-201ENST00000561772 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L6-201ENST00000626483 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L1-201ENST00000627662 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L8-201ENST00000629013 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L3-201ENST00000630187 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L7-201ENST00000630678 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DUX4L5-201ENST00000630834 1275 ntBASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF1Q5TC12 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 EEF1DP3-203ENST00000566025 782 ntBASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 AC053503.5-201ENST00000601508 636 ntBASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.71■□□□□ 0.43
ATPAF1Q5TC12 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATPAF1Q5TC12 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.71■□□□□ 0.42
ATPAF1Q5TC12 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATPAF1Q5TC12 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms