Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 POU5F1P4-201ENST00000413175 1085 ntBASIC19.69■□□□□ 0.74
PDCD4Q53EL6 AC096631.2-201ENST00000436136 790 ntBASIC19.69■□□□□ 0.74
PDCD4Q53EL6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.68■□□□□ 0.74
PDCD4Q53EL6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 TPRG1LP1-201ENST00000598702 760 ntBASIC19.68■□□□□ 0.74
PDCD4Q53EL6 AC008175.2-201ENST00000612840 297 ntBASIC19.68■□□□□ 0.74
PDCD4Q53EL6 AC131212.1-201ENST00000613771 668 ntBASIC19.68■□□□□ 0.74
PDCD4Q53EL6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDCD4Q53EL6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 AC112907.3-201ENST00000577781 2400 ntBASIC19.67■□□□□ 0.74
PDCD4Q53EL6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDCD4Q53EL6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 MIR939-201ENST00000401314 82 ntBASIC19.66■□□□□ 0.74
PDCD4Q53EL6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 AL355001.2-201ENST00000620617 1191 ntBASIC19.66■□□□□ 0.74
PDCD4Q53EL6 RARRES2P11-201ENST00000635158 484 ntBASIC19.66■□□□□ 0.74
PDCD4Q53EL6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
PDCD4Q53EL6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 AC091305.1-201ENST00000479476 895 ntBASIC19.65■□□□□ 0.74
PDCD4Q53EL6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDCD4Q53EL6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDCD4Q53EL6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDCD4Q53EL6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDCD4Q53EL6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms