Protein–RNA interactions for Protein: Q3E827

LSO1, Protein LSO1, yeastyeast

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSO1Q3E827 ECM5YMR176W 4236 nt3.91□□□□□ -1.78
LSO1Q3E827 YCR075W-AYCR075W-A 228 nt3.91□□□□□ -1.78
LSO1Q3E827 CDC36YDL165W 576 nt3.91□□□□□ -1.78
LSO1Q3E827 AST2YER101C 1293 nt3.91□□□□□ -1.78
LSO1Q3E827 YGR174W-AYGR174W-A 87 nt3.91□□□□□ -1.78
LSO1Q3E827 TMA22YJR014W 597 nt3.91□□□□□ -1.78
LSO1Q3E827 USA1YML029W 2517 nt3.91□□□□□ -1.78
LSO1Q3E827 ZDS1YMR273C 2748 nt3.91□□□□□ -1.78
LSO1Q3E827 VPS52YDR484W 1926 nt3.9□□□□□ -1.78
LSO1Q3E827 RNR1YER070W 2667 nt3.9□□□□□ -1.79
LSO1Q3E827 YPK1YKL126W 2043 nt3.9□□□□□ -1.79
LSO1Q3E827 YDR034C-DYDR034C-D 5313 nt3.9□□□□□ -1.79
LSO1Q3E827 RAD26YJR035W 3258 nt3.89□□□□□ -1.79
LSO1Q3E827 APC11YDL008W 498 nt3.89□□□□□ -1.79
LSO1Q3E827 YDL211CYDL211C 1119 nt3.89□□□□□ -1.79
LSO1Q3E827 YGR051CYGR051C 324 nt3.89□□□□□ -1.79
LSO1Q3E827 SPT4YGR063C 309 nt3.89□□□□□ -1.79
LSO1Q3E827 YGR069WYGR069W 336 nt3.89□□□□□ -1.79
LSO1Q3E827 NCE101YJL205C 162 nt3.89□□□□□ -1.79
LSO1Q3E827 RPL8BYLL045C 771 nt3.89□□□□□ -1.79
LSO1Q3E827 TIM12YBR091C 330 nt3.89□□□□□ -1.79
LSO1Q3E827 OSW7YFR039C 1533 nt3.89□□□□□ -1.79
LSO1Q3E827 RPB2YOR151C 3675 nt3.89□□□□□ -1.79
LSO1Q3E827 NUP82YJL061W 2142 nt3.88□□□□□ -1.79
LSO1Q3E827 YDR344CYDR344C 444 nt3.88□□□□□ -1.79
LSO1Q3E827 MZM1YDR493W 372 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)CtQ(UUG)C 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)D1tQ(UUG)D1 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)D2tQ(UUG)D2 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)D3tQ(UUG)D3 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)E1tQ(UUG)E1 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)HtQ(UUG)H 72 nt3.88□□□□□ -1.79
LSO1Q3E827 tQ(UUG)LtQ(UUG)L 72 nt3.88□□□□□ -1.79
LSO1Q3E827 YHR214C-EYHR214C-E 300 nt3.88□□□□□ -1.79
LSO1Q3E827 YKR033CYKR033C 426 nt3.88□□□□□ -1.79
LSO1Q3E827 YLR458WYLR458W 381 nt3.88□□□□□ -1.79
LSO1Q3E827 YOR050CYOR050C 348 nt3.88□□□□□ -1.79
LSO1Q3E827 RPS7AYOR096W 573 nt3.88□□□□□ -1.79
LSO1Q3E827 TLC1TLC1 1301 nt3.88□□□□□ -1.79
LSO1Q3E827 SWH1YAR042W 3567 nt3.88□□□□□ -1.79
LSO1Q3E827 FSH3YOR280C 801 nt3.87□□□□□ -1.79
LSO1Q3E827 ATP15YPL271W 189 nt3.87□□□□□ -1.79
LSO1Q3E827 MGR1YCL044C 1254 nt3.87□□□□□ -1.79
LSO1Q3E827 CWH43YCR017C 2862 nt3.86□□□□□ -1.79
LSO1Q3E827 APE2YKL157W 2859 nt3.86□□□□□ -1.79
LSO1Q3E827 YDL041WYDL041W 354 nt3.86□□□□□ -1.79
LSO1Q3E827 RPL35AYDL191W 363 nt3.86□□□□□ -1.79
LSO1Q3E827 RPS17BYDR447C 411 nt3.86□□□□□ -1.79
LSO1Q3E827 RPS24AYER074W 408 nt3.86□□□□□ -1.79
LSO1Q3E827 RPL14BYHL001W 417 nt3.86□□□□□ -1.79
LSO1Q3E827 HSK3YKL138C-A 210 nt3.86□□□□□ -1.79
LSO1Q3E827 SMA2YML066C 1110 nt3.86□□□□□ -1.79
LSO1Q3E827 SWD3YBR175W 948 nt3.86□□□□□ -1.79
LSO1Q3E827 PEX1YKL197C 3132 nt3.86□□□□□ -1.79
LSO1Q3E827 ETP1YHL010C 1758 nt3.86□□□□□ -1.79
LSO1Q3E827 SGO1YOR073W 1773 nt3.86□□□□□ -1.79
LSO1Q3E827 MYO5YMR109W 3660 nt3.85□□□□□ -1.79
LSO1Q3E827 SYT1YPR095C 3681 nt3.85□□□□□ -1.79
LSO1Q3E827 GPI14YJR013W 1212 nt3.85□□□□□ -1.79
LSO1Q3E827 RPS18BYML026C 441 nt3.85□□□□□ -1.79
LSO1Q3E827 YMR307C-AYMR307C-A 195 nt3.85□□□□□ -1.79
LSO1Q3E827 YOR072W-AYOR072W-A 249 nt3.85□□□□□ -1.79
LSO1Q3E827 YPL182CYPL182C 384 nt3.85□□□□□ -1.79
LSO1Q3E827 GCR1YPL075W 2358 nt3.85□□□□□ -1.79
LSO1Q3E827 RDN5-1RDN5-1 121 nt3.84□□□□□ -1.79
LSO1Q3E827 RDN5-6RDN5-6 121 nt3.84□□□□□ -1.79
LSO1Q3E827 YML116W-AYML116W-A 303 nt3.84□□□□□ -1.79
LSO1Q3E827 VPS3YDR495C 3036 nt3.84□□□□□ -1.79
LSO1Q3E827 COG3YER157W 2406 nt3.84□□□□□ -1.8
LSO1Q3E827 BRO1YPL084W 2535 nt3.84□□□□□ -1.8
LSO1Q3E827 SOD1YJR104C 465 nt3.83□□□□□ -1.8
LSO1Q3E827 YLR352WYLR352W 2424 nt3.83□□□□□ -1.8
LSO1Q3E827 YCK3YER123W 1575 nt3.82□□□□□ -1.8
LSO1Q3E827 HTL1YCR020W-B 237 nt3.82□□□□□ -1.8
LSO1Q3E827 snR79snR79 84 nt3.82□□□□□ -1.8
LSO1Q3E827 COX18YGR062C 951 nt3.82□□□□□ -1.8
LSO1Q3E827 YOR131CYOR131C 657 nt3.82□□□□□ -1.8
LSO1Q3E827 snR49snR49 165 nt3.82□□□□□ -1.8
LSO1Q3E827 FLO8YER109C 2400 nt3.82□□□□□ -1.8
LSO1Q3E827 AIM9YER080W 1884 nt3.81□□□□□ -1.8
LSO1Q3E827 YJL181WYJL181W 1836 nt3.81□□□□□ -1.8
LSO1Q3E827 SIZ1YDR409W 2715 nt3.81□□□□□ -1.8
LSO1Q3E827 EXO84YBR102C 2262 nt3.81□□□□□ -1.8
LSO1Q3E827 FLO9YAL063C 3969 nt3.81□□□□□ -1.8
LSO1Q3E827 RPS23AYGR118W 438 nt3.81□□□□□ -1.8
LSO1Q3E827 RPL14AYKL006W 417 nt3.81□□□□□ -1.8
LSO1Q3E827 FMP46YKR049C 402 nt3.81□□□□□ -1.8
LSO1Q3E827 LCL2YLR104W 396 nt3.81□□□□□ -1.8
LSO1Q3E827 MGR2YPL098C 342 nt3.81□□□□□ -1.8
LSO1Q3E827 SRP72YPL210C 1923 nt3.81□□□□□ -1.8
LSO1Q3E827 LYP1YNL268W 1836 nt3.81□□□□□ -1.8
LSO1Q3E827 MTR4YJL050W 3222 nt3.81□□□□□ -1.8
LSO1Q3E827 CHD1YER164W 4407 nt3.81□□□□□ -1.8
LSO1Q3E827 FUS1YCL027W 1539 nt3.8□□□□□ -1.8
LSO1Q3E827 DPH6YLR143W 2058 nt3.8□□□□□ -1.8
LSO1Q3E827 PAC1YOR269W 1485 nt3.8□□□□□ -1.8
LSO1Q3E827 SPT6YGR116W 4356 nt3.8□□□□□ -1.8
LSO1Q3E827 TOM70YNL121C 1854 nt3.8□□□□□ -1.8
LSO1Q3E827 NUP159YIL115C 4383 nt3.8□□□□□ -1.8
LSO1Q3E827 YFL065CYFL065C 309 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 37.5 ms