Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EFNB3Q15768 AC087633.2-202ENST00000565166 1439 ntBASIC17.53■□□□□ 0.4
EFNB3Q15768 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.53■□□□□ 0.4
EFNB3Q15768 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFNB3Q15768 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFNB3Q15768 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.52■□□□□ 0.4
EFNB3Q15768 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.52■□□□□ 0.4
EFNB3Q15768 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EFNB3Q15768 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
EFNB3Q15768 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 POU5F1P3-201ENST00000428824 1078 ntBASIC17.52■□□□□ 0.4
EFNB3Q15768 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
EFNB3Q15768 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.52■□□□□ 0.4
EFNB3Q15768 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.52■□□□□ 0.4
EFNB3Q15768 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.52■□□□□ 0.4
EFNB3Q15768 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.52■□□□□ 0.4
EFNB3Q15768 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.52■□□□□ 0.4
EFNB3Q15768 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.52■□□□□ 0.4
EFNB3Q15768 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EFNB3Q15768 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.52■□□□□ 0.4
EFNB3Q15768 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EFNB3Q15768 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFNB3Q15768 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
EFNB3Q15768 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.52■□□□□ 0.39
EFNB3Q15768 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
EFNB3Q15768 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.51■□□□□ 0.39
EFNB3Q15768 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EFNB3Q15768 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.51■□□□□ 0.39
EFNB3Q15768 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.51■□□□□ 0.39
EFNB3Q15768 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.51■□□□□ 0.39
EFNB3Q15768 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
EFNB3Q15768 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 Z98882.1-201ENST00000622160 2253 ntBASIC17.51■□□□□ 0.39
EFNB3Q15768 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
EFNB3Q15768 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EFNB3Q15768 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
EFNB3Q15768 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.5■□□□□ 0.39
EFNB3Q15768 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.5■□□□□ 0.39
EFNB3Q15768 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.5■□□□□ 0.39
EFNB3Q15768 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
EFNB3Q15768 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.5■□□□□ 0.39
EFNB3Q15768 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.5■□□□□ 0.39
EFNB3Q15768 HLA-B-256ENST00000639848 1089 ntBASIC17.5■□□□□ 0.39
EFNB3Q15768 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
EFNB3Q15768 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.5■□□□□ 0.39
EFNB3Q15768 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNB3Q15768 FBXW4P1-201ENST00000426721 2239 ntBASIC17.49■□□□□ 0.39
EFNB3Q15768 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNB3Q15768 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.49■□□□□ 0.39
EFNB3Q15768 AL137060.1-201ENST00000618151 2648 ntBASIC17.49■□□□□ 0.39
EFNB3Q15768 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNB3Q15768 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNB3Q15768 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
EFNB3Q15768 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.49■□□□□ 0.39
EFNB3Q15768 AC060766.5-201ENST00000590539 871 ntBASIC17.49■□□□□ 0.39
EFNB3Q15768 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.49■□□□□ 0.39
EFNB3Q15768 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.49■□□□□ 0.39
EFNB3Q15768 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
EFNB3Q15768 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.49■□□□□ 0.39
EFNB3Q15768 AL024507.2-201ENST00000606070 2574 ntBASIC17.49■□□□□ 0.39
EFNB3Q15768 AC011484.1-201ENST00000377652 1995 ntBASIC17.49■□□□□ 0.39
EFNB3Q15768 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
EFNB3Q15768 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNB3Q15768 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.48■□□□□ 0.39
EFNB3Q15768 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms