Protein–RNA interactions for Protein: Q12470

TY1A-NL2, Transposon Ty1-NL2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-NL2Q12470 YNL103W-AYNL103W-A 90 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 YPR092WYPR092W 306 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 PDR15YDR406W 4590 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 SEA4YBL104C 3117 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 YGR266WYGR266W 2106 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 PXA1YPL147W 2613 nt4.37□□□□□ -1.71
TY1A-NL2Q12470 PUF6YDR496C 1971 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 ROT2YBR229C 2865 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 snR79snR79 84 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 PMP2YEL017C-A 132 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 YHR071C-AYHR071C-A 321 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 YIL059CYIL059C 366 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 DLS1YJL065C 504 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 RPS17AYML024W 411 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 SGF11YPL047W 300 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 RED1YLR263W 2484 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 YAP1YML007W 1953 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 YOR1YGR281W 4434 nt4.36□□□□□ -1.71
TY1A-NL2Q12470 RAD16YBR114W 2373 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 RBK1YCR036W 1002 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 ULI1YFR026C 510 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 USE1YGL098W 738 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 YIR030W-AYIR030W-A 384 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 NUP82YJL061W 2142 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 GON7YJL184W 372 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 YPR146CYPR146C 330 nt4.35□□□□□ -1.71
TY1A-NL2Q12470 MSH1YHR120W 2880 nt4.34□□□□□ -1.71
TY1A-NL2Q12470 YGL074CYGL074C 327 nt4.34□□□□□ -1.71
TY1A-NL2Q12470 YPR053CYPR053C 456 nt4.34□□□□□ -1.71
TY1A-NL2Q12470 HOT1YMR172W 2160 nt4.34□□□□□ -1.72
TY1A-NL2Q12470 YPK1YKL126W 2043 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 SEC9YGR009C 1956 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 RPL38YLR325C 237 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 ASC1YMR116C 960 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 SNC2YOR327C 348 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 CDC24YAL041W 2565 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 IOC3YFR013W 2364 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 ARK1YNL020C 1917 nt4.33□□□□□ -1.72
TY1A-NL2Q12470 GEP4YHR100C 558 nt4.32□□□□□ -1.72
TY1A-NL2Q12470 YPR195CYPR195C 330 nt4.32□□□□□ -1.72
TY1A-NL2Q12470 TRZ1YKR079C 2517 nt4.32□□□□□ -1.72
TY1A-NL2Q12470 GPI13YLL031C 3054 nt4.32□□□□□ -1.72
TY1A-NL2Q12470 TCP1YDR212W 1680 nt4.32□□□□□ -1.72
TY1A-NL2Q12470 RPL23AYBL087C 414 nt4.31□□□□□ -1.72
TY1A-NL2Q12470 CDC27YBL084C 2277 nt4.31□□□□□ -1.72
TY1A-NL2Q12470 NMA111YNL123W 2994 nt4.31□□□□□ -1.72
TY1A-NL2Q12470 AIM21YIR003W 2040 nt4.31□□□□□ -1.72
TY1A-NL2Q12470 YDL022C-AYDL022C-A 249 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)CtN(GUU)C 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)FtN(GUU)F 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)GtN(GUU)G 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)KtN(GUU)K 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)LtN(GUU)L 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)N1tN(GUU)N1 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)N2tN(GUU)N2 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)O1tN(GUU)O1 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)O2tN(GUU)O2 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 tN(GUU)PtN(GUU)P 74 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 YIL058WYIL058W 285 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 FEX2YPL279C 1128 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 TIF4632YGL049C 2745 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 ACE2YLR131C 2313 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 GRS2YPR081C 1857 nt4.3□□□□□ -1.72
TY1A-NL2Q12470 LEU3YLR451W 2661 nt4.29□□□□□ -1.72
TY1A-NL2Q12470 MSC7YHR039C 1935 nt4.29□□□□□ -1.72
TY1A-NL2Q12470 MSR1YHR091C 1932 nt4.29□□□□□ -1.72
TY1A-NL2Q12470 YEL045CYEL045C 426 nt4.29□□□□□ -1.72
TY1A-NL2Q12470 GIP4YAL031C 2283 nt4.29□□□□□ -1.72
TY1A-NL2Q12470 PEX1YKL197C 3132 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 YRM1YOR172W 2361 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 DNF2YDR093W 4839 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 snR61snR61 90 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 YKL156C-AYKL156C-A 117 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 YML007C-AYML007C-A 111 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 VTC4YJL012C 2166 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 PTA1YAL043C 2358 nt4.28□□□□□ -1.72
TY1A-NL2Q12470 YOL057WYOL057W 2136 nt4.27□□□□□ -1.73
TY1A-NL2Q12470 YIL142C-AYIL142C-A 333 nt4.27□□□□□ -1.73
TY1A-NL2Q12470 UPS1YLR193C 528 nt4.27□□□□□ -1.73
TY1A-NL2Q12470 KHA1YJL094C 2622 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 TGL4YKR089C 2733 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 SSS1YDR086C 243 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 ERP6YGL002W 651 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 YNL067W-BYNL067W-B 141 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 GAL4YPL248C 2646 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 PAN1YIR006C 4443 nt4.26□□□□□ -1.73
TY1A-NL2Q12470 GCD6YDR211W 2139 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 PMP3YDR276C 168 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 RPS18AYDR450W 441 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 CDH1YGL003C 1701 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 NAG1YGR031C-A 492 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 YGR269WYGR269W 327 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 CWH43YCR017C 2862 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 PIG1YLR273C 1947 nt4.25□□□□□ -1.73
TY1A-NL2Q12470 DIS3YOL021C 3006 nt4.24□□□□□ -1.73
TY1A-NL2Q12470 RRN6YBL014C 2685 nt4.24□□□□□ -1.73
TY1A-NL2Q12470 YDR286CYDR286C 345 nt4.24□□□□□ -1.73
TY1A-NL2Q12470 YER121WYER121W 345 nt4.24□□□□□ -1.73
TY1A-NL2Q12470 YNL097W-AYNL097W-A 156 nt4.24□□□□□ -1.73
TY1A-NL2Q12470 ECM5YMR176W 4236 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 103.5 ms