Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 ERG28YER044C 447 nt3.54□□□□□ -1.84
LCD1Q04377 YKL118WYKL118W 312 nt3.54□□□□□ -1.84
LCD1Q04377 YLR012CYLR012C 300 nt3.54□□□□□ -1.84
LCD1Q04377 RPL37AYLR185W 267 nt3.54□□□□□ -1.84
LCD1Q04377 YPR039WYPR039W 336 nt3.54□□□□□ -1.84
LCD1Q04377 UBP14YBR058C 2346 nt3.54□□□□□ -1.84
LCD1Q04377 MDM32YOR147W 1869 nt3.54□□□□□ -1.84
LCD1Q04377 GCD6YDR211W 2139 nt3.53□□□□□ -1.84
LCD1Q04377 SNF12YNR023W 1701 nt3.53□□□□□ -1.84
LCD1Q04377 ATP17YDR377W 306 nt3.53□□□□□ -1.84
LCD1Q04377 IRC4YDR540C 540 nt3.53□□□□□ -1.84
LCD1Q04377 tQ(UUG)BtQ(UUG)B 72 nt3.53□□□□□ -1.84
LCD1Q04377 YHR139C-AYHR139C-A 312 nt3.53□□□□□ -1.84
LCD1Q04377 YJR023CYJR023C 402 nt3.53□□□□□ -1.84
LCD1Q04377 DIE2YGR227W 1578 nt3.53□□□□□ -1.84
LCD1Q04377 VHR2YER064C 1518 nt3.53□□□□□ -1.84
LCD1Q04377 CWC22YGR278W 1734 nt3.53□□□□□ -1.85
LCD1Q04377 YDL180WYDL180W 1644 nt3.52□□□□□ -1.85
LCD1Q04377 YDL068WYDL068W 330 nt3.52□□□□□ -1.85
LCD1Q04377 TIF35YDR429C 825 nt3.52□□□□□ -1.85
LCD1Q04377 NOP19YGR251W 591 nt3.52□□□□□ -1.85
LCD1Q04377 MAM33YIL070C 801 nt3.52□□□□□ -1.85
LCD1Q04377 RPS21BYJL136C 264 nt3.52□□□□□ -1.85
LCD1Q04377 YOR146WYOR146W 306 nt3.52□□□□□ -1.85
LCD1Q04377 YOR231C-AYOR231C-A 201 nt3.52□□□□□ -1.85
LCD1Q04377 YKL100CYKL100C 1764 nt3.52□□□□□ -1.85
LCD1Q04377 TRZ1YKR079C 2517 nt3.52□□□□□ -1.85
LCD1Q04377 REG1YDR028C 3045 nt3.52□□□□□ -1.85
LCD1Q04377 MED1YPR070W 1701 nt3.52□□□□□ -1.85
LCD1Q04377 NMD2YHR077C 3270 nt3.52□□□□□ -1.85
LCD1Q04377 ATP22YDR350C 2055 nt3.51□□□□□ -1.85
LCD1Q04377 NMA111YNL123W 2994 nt3.51□□□□□ -1.85
LCD1Q04377 COX23YHR116W 456 nt3.51□□□□□ -1.85
LCD1Q04377 PET191YJR034W 327 nt3.51□□□□□ -1.85
LCD1Q04377 YBL065WYBL065W 345 nt3.51□□□□□ -1.85
LCD1Q04377 RPS7BYNL096C 573 nt3.51□□□□□ -1.85
LCD1Q04377 ISU1YPL135W 498 nt3.51□□□□□ -1.85
LCD1Q04377 YPL276WYPL276W 438 nt3.51□□□□□ -1.85
LCD1Q04377 NOP4YPL043W 2058 nt3.51□□□□□ -1.85
LCD1Q04377 FLO5YHR211W 3228 nt3.5□□□□□ -1.85
LCD1Q04377 ATG13YPR185W 2217 nt3.5□□□□□ -1.85
LCD1Q04377 YIL054WYIL054W 318 nt3.5□□□□□ -1.85
LCD1Q04377 VTI1YMR197C 654 nt3.5□□□□□ -1.85
LCD1Q04377 YPR077CYPR077C 372 nt3.5□□□□□ -1.85
LCD1Q04377 MSH2YOL090W 2895 nt3.5□□□□□ -1.85
LCD1Q04377 MDM1YML104C 3384 nt3.49□□□□□ -1.85
LCD1Q04377 BIT61YJL058C 1632 nt3.49□□□□□ -1.85
LCD1Q04377 PMR1YGL167C 2853 nt3.49□□□□□ -1.85
LCD1Q04377 YER066C-AYER066C-A 501 nt3.49□□□□□ -1.85
LCD1Q04377 RPC10YHR143W-A 213 nt3.49□□□□□ -1.85
LCD1Q04377 YJR140W-AYJR140W-A 150 nt3.49□□□□□ -1.85
LCD1Q04377 YKL111CYKL111C 336 nt3.49□□□□□ -1.85
LCD1Q04377 YMR031W-AYMR031W-A 327 nt3.49□□□□□ -1.85
LCD1Q04377 snR42snR42 351 nt3.49□□□□□ -1.85
LCD1Q04377 SET1YHR119W 3243 nt3.48□□□□□ -1.85
LCD1Q04377 NDT80YHR124W 1884 nt3.48□□□□□ -1.85
LCD1Q04377 SPC72YAL047C 1869 nt3.48□□□□□ -1.85
LCD1Q04377 TSA2YDR453C 591 nt3.48□□□□□ -1.85
LCD1Q04377 SDC1YDR469W 528 nt3.48□□□□□ -1.85
LCD1Q04377 YHL037CYHL037C 402 nt3.48□□□□□ -1.85
LCD1Q04377 YIR040CYIR040C 333 nt3.48□□□□□ -1.85
LCD1Q04377 YPR014CYPR014C 330 nt3.48□□□□□ -1.85
LCD1Q04377 YJR003CYJR003C 1560 nt3.47□□□□□ -1.85
LCD1Q04377 YER188C-AYER188C-A 300 nt3.47□□□□□ -1.85
LCD1Q04377 RPS23AYGR118W 438 nt3.47□□□□□ -1.85
LCD1Q04377 JIP3YLR331C 378 nt3.47□□□□□ -1.85
LCD1Q04377 YPP1YGR198W 2454 nt3.47□□□□□ -1.85
LCD1Q04377 TFB1YDR311W 1929 nt3.46□□□□□ -1.85
LCD1Q04377 CCT7YJL111W 1653 nt3.46□□□□□ -1.85
LCD1Q04377 GCD10YNL062C 1437 nt3.46□□□□□ -1.86
LCD1Q04377 FUN30YAL019W 3396 nt3.46□□□□□ -1.86
LCD1Q04377 YCR022CYCR022C 345 nt3.46□□□□□ -1.86
LCD1Q04377 YDL152WYDL152W 366 nt3.46□□□□□ -1.86
LCD1Q04377 YER076W-AYER076W-A 348 nt3.46□□□□□ -1.86
LCD1Q04377 YAF9YNL107W 681 nt3.46□□□□□ -1.86
LCD1Q04377 snR191snR191 274 nt3.46□□□□□ -1.86
LCD1Q04377 TFC4YGR047C 3078 nt3.45□□□□□ -1.86
LCD1Q04377 VPS3YDR495C 3036 nt3.45□□□□□ -1.86
LCD1Q04377 NHP2YDL208W 471 nt3.45□□□□□ -1.86
LCD1Q04377 YKL083WYKL083W 615 nt3.45□□□□□ -1.86
LCD1Q04377 NSL1YPL233W 651 nt3.45□□□□□ -1.86
LCD1Q04377 RCY1YJL204C 2523 nt3.45□□□□□ -1.86
LCD1Q04377 YSW1YBR148W 1830 nt3.44□□□□□ -1.86
LCD1Q04377 MYO5YMR109W 3660 nt3.44□□□□□ -1.86
LCD1Q04377 HPA3YEL066W 540 nt3.44□□□□□ -1.86
LCD1Q04377 YER107W-AYER107W-A 321 nt3.44□□□□□ -1.86
LCD1Q04377 FYV4YHR059W 393 nt3.44□□□□□ -1.86
LCD1Q04377 RAD5YLR032W 3510 nt3.44□□□□□ -1.86
LCD1Q04377 CDH1YGL003C 1701 nt3.44□□□□□ -1.86
LCD1Q04377 YLR278CYLR278C 4026 nt3.44□□□□□ -1.86
LCD1Q04377 PDC2YDR081C 2778 nt3.44□□□□□ -1.86
LCD1Q04377 SPO71YDR104C 3738 nt3.43□□□□□ -1.86
LCD1Q04377 GPI8YDR331W 1236 nt3.43□□□□□ -1.86
LCD1Q04377 YDR366CYDR366C 399 nt3.43□□□□□ -1.86
LCD1Q04377 SWD3YBR175W 948 nt3.43□□□□□ -1.86
LCD1Q04377 TAO3YIL129C 7131 nt3.43□□□□□ -1.86
LCD1Q04377 SNX41YDR425W 1878 nt3.42□□□□□ -1.86
LCD1Q04377 YDR413CYDR413C 576 nt3.42□□□□□ -1.86
LCD1Q04377 YER097WYER097W 330 nt3.42□□□□□ -1.86
LCD1Q04377 YHL006W-AYHL006W-A 354 nt3.42□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms