Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
YBX1P67809 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
YBX1P67809 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
YBX1P67809 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
YBX1P67809 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
YBX1P67809 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
YBX1P67809 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 AC091799.1-201ENST00000422823 811 ntBASIC20.01■□□□□ 0.79
YBX1P67809 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.01■□□□□ 0.79
YBX1P67809 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.01■□□□□ 0.79
YBX1P67809 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.01■□□□□ 0.79
YBX1P67809 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
YBX1P67809 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YBX1P67809 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
YBX1P67809 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20■□□□□ 0.79
YBX1P67809 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20■□□□□ 0.79
YBX1P67809 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20■□□□□ 0.79
YBX1P67809 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
YBX1P67809 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20■□□□□ 0.79
YBX1P67809 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20■□□□□ 0.79
YBX1P67809 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20■□□□□ 0.79
YBX1P67809 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20■□□□□ 0.79
YBX1P67809 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YBX1P67809 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20■□□□□ 0.79
YBX1P67809 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
YBX1P67809 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20■□□□□ 0.79
YBX1P67809 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
YBX1P67809 AP005212.1-201ENST00000581547 1997 ntBASIC19.99■□□□□ 0.79
YBX1P67809 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 CROCCP5-201ENST00000436658 830 ntBASIC19.99■□□□□ 0.79
YBX1P67809 AC245052.3-201ENST00000450182 901 ntBASIC19.99■□□□□ 0.79
YBX1P67809 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.99■□□□□ 0.79
YBX1P67809 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
YBX1P67809 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.99■□□□□ 0.79
YBX1P67809 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YBX1P67809 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YBX1P67809 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.99■□□□□ 0.79
YBX1P67809 AL121603.2-201ENST00000557373 2117 ntBASIC19.99■□□□□ 0.79
YBX1P67809 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
YBX1P67809 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
YBX1P67809 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 AC090192.1-201ENST00000517740 490 ntBASIC19.98■□□□□ 0.79
YBX1P67809 AC243732.1-201ENST00000612648 864 ntBASIC19.98■□□□□ 0.79
YBX1P67809 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 AFG3L1P-217ENST00000557444 2447 ntBASIC19.98■□□□□ 0.79
YBX1P67809 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
YBX1P67809 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YBX1P67809 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 AC068338.2-201ENST00000563278 1430 ntBASIC19.97■□□□□ 0.79
YBX1P67809 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
YBX1P67809 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.97■□□□□ 0.79
YBX1P67809 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.97■□□□□ 0.79
YBX1P67809 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
YBX1P67809 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 AL050303.2-201ENST00000619798 666 ntBASIC19.97■□□□□ 0.79
YBX1P67809 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.97■□□□□ 0.79
YBX1P67809 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms