Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL38P63173 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL38P63173 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL38P63173 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RPL38P63173 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL38P63173 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPL38P63173 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL38P63173 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL38P63173 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.72■□□□□ 0.75
RPL38P63173 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL38P63173 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RPL38P63173 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL38P63173 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
RPL38P63173 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RPL38P63173 AL121603.2-201ENST00000557373 2117 ntBASIC19.72■□□□□ 0.75
RPL38P63173 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL38P63173 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.71■□□□□ 0.75
RPL38P63173 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RPL38P63173 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.71■□□□□ 0.75
RPL38P63173 AC104187.1-201ENST00000607510 612 ntBASIC19.71■□□□□ 0.75
RPL38P63173 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.71■□□□□ 0.75
RPL38P63173 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RPL38P63173 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPL38P63173 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPL38P63173 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.7■□□□□ 0.74
RPL38P63173 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L2-201ENST00000561772 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.7■□□□□ 0.74
RPL38P63173 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L6-201ENST00000626483 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L1-201ENST00000627662 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L8-201ENST00000629013 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L3-201ENST00000630187 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L7-201ENST00000630678 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 DUX4L5-201ENST00000630834 1275 ntBASIC19.7■□□□□ 0.74
RPL38P63173 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.7■□□□□ 0.74
RPL38P63173 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL38P63173 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.7■□□□□ 0.74
RPL38P63173 AC112907.3-201ENST00000577781 2400 ntBASIC19.7■□□□□ 0.74
RPL38P63173 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
RPL38P63173 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.69■□□□□ 0.74
RPL38P63173 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RPL38P63173 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.69■□□□□ 0.74
RPL38P63173 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPL38P63173 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.69■□□□□ 0.74
RPL38P63173 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms