Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB5BP61020 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAB5BP61020 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB5BP61020 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB5BP61020 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB5BP61020 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB5BP61020 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB5BP61020 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB5BP61020 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB5BP61020 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB5BP61020 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB5BP61020 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RAB5BP61020 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RAB5BP61020 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB5BP61020 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB5BP61020 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB5BP61020 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB5BP61020 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB5BP61020 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB5BP61020 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB5BP61020 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
RAB5BP61020 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 AC018470.1-201ENST00000624790 3129 ntBASIC16.1■□□□□ 0.17
RAB5BP61020 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB5BP61020 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB5BP61020 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB5BP61020 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB5BP61020 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB5BP61020 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 AL022069.1-201ENST00000568025 1636 ntBASIC16.09■□□□□ 0.17
RAB5BP61020 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB5BP61020 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB5BP61020 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB5BP61020 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB5BP61020 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB5BP61020 AC104564.3-201ENST00000582367 638 ntBASIC16.09■□□□□ 0.17
RAB5BP61020 MIR3960-201ENST00000583311 91 ntBASIC16.09■□□□□ 0.17
RAB5BP61020 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB5BP61020 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB5BP61020 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB5BP61020 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB5BP61020 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB5BP61020 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAB5BP61020 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB5BP61020 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB5BP61020 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
RAB5BP61020 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAB5BP61020 AC090877.2-201ENST00000558441 1738 ntBASIC16.08■□□□□ 0.17
RAB5BP61020 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.08■□□□□ 0.17
RAB5BP61020 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.08■□□□□ 0.17
RAB5BP61020 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
RAB5BP61020 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RAB5BP61020 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RAB5BP61020 AC005332.7-201ENST00000614046 2005 ntBASIC16.08■□□□□ 0.16
RAB5BP61020 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB5BP61020 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms