Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC116050.2-201ENST00000612102 1779 ntBASIC21.16■□□□□ 0.98
EIF3EP60228 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.16■□□□□ 0.98
EIF3EP60228 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
EIF3EP60228 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
EIF3EP60228 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.16■□□□□ 0.98
EIF3EP60228 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.16■□□□□ 0.98
EIF3EP60228 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
EIF3EP60228 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
EIF3EP60228 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
EIF3EP60228 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
EIF3EP60228 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EIF3EP60228 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
EIF3EP60228 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.15■□□□□ 0.98
EIF3EP60228 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.15■□□□□ 0.98
EIF3EP60228 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.15■□□□□ 0.98
EIF3EP60228 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.15■□□□□ 0.98
EIF3EP60228 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.15■□□□□ 0.98
EIF3EP60228 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EIF3EP60228 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.15■□□□□ 0.98
EIF3EP60228 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3EP60228 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
EIF3EP60228 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.14■□□□□ 0.98
EIF3EP60228 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3EP60228 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3EP60228 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.14■□□□□ 0.97
EIF3EP60228 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.14■□□□□ 0.97
EIF3EP60228 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.14■□□□□ 0.97
EIF3EP60228 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.14■□□□□ 0.97
EIF3EP60228 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.14■□□□□ 0.97
EIF3EP60228 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
EIF3EP60228 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3EP60228 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3EP60228 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
EIF3EP60228 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3EP60228 AL391422.3-201ENST00000603791 2761 ntBASIC21.13■□□□□ 0.97
EIF3EP60228 AL512408.1-201ENST00000569378 2000 ntBASIC21.13■□□□□ 0.97
EIF3EP60228 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3EP60228 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EIF3EP60228 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3EP60228 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.13■□□□□ 0.97
EIF3EP60228 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
EIF3EP60228 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.12■□□□□ 0.97
EIF3EP60228 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
EIF3EP60228 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.12■□□□□ 0.97
EIF3EP60228 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.12■□□□□ 0.97
EIF3EP60228 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.12■□□□□ 0.97
EIF3EP60228 KRT18P61-201ENST00000585825 1298 ntBASIC21.12■□□□□ 0.97
EIF3EP60228 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EIF3EP60228 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EIF3EP60228 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.12■□□□□ 0.97
EIF3EP60228 RBM17P2-201ENST00000616397 1405 ntBASIC21.12■□□□□ 0.97
EIF3EP60228 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3EP60228 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
EIF3EP60228 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EIF3EP60228 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EIF3EP60228 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EIF3EP60228 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EIF3EP60228 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EIF3EP60228 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EIF3EP60228 KRT19P1-201ENST00000405746 1186 ntBASIC21.11■□□□□ 0.97
EIF3EP60228 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EIF3EP60228 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms