Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AF106564.1-201ENST00000607058 2553 ntBASIC18.37■□□□□ 0.53
CLDN18P56856 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 RNA5SP413-201ENST00000516373 109 ntBASIC18.37■□□□□ 0.53
CLDN18P56856 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.37■□□□□ 0.53
CLDN18P56856 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN18P56856 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN18P56856 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN18P56856 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN18P56856 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN18P56856 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CLDN18P56856 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 PGM5P4-201ENST00000421970 445 ntBASIC18.36■□□□□ 0.53
CLDN18P56856 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLDN18P56856 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN18P56856 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN18P56856 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN18P56856 MIR4651-201ENST00000582622 73 ntBASIC18.36■□□□□ 0.53
CLDN18P56856 AC121338.2-201ENST00000622535 1744 ntBASIC18.36■□□□□ 0.53
CLDN18P56856 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN18P56856 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN18P56856 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN18P56856 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN18P56856 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 ABHD17AP1-201ENST00000358206 933 ntBASIC18.35■□□□□ 0.53
CLDN18P56856 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN18P56856 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CLDN18P56856 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN18P56856 AC027702.1-201ENST00000563810 1770 ntBASIC18.35■□□□□ 0.53
CLDN18P56856 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN18P56856 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CLDN18P56856 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN18P56856 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CLDN18P56856 AL356652.1-201ENST00000615962 565 ntBASIC18.34■□□□□ 0.53
CLDN18P56856 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN18P56856 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN18P56856 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN18P56856 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN18P56856 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN18P56856 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN18P56856 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.53
CLDN18P56856 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.33■□□□□ 0.53
CLDN18P56856 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLDN18P56856 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN18P56856 TSPY20P-201ENST00000450910 630 ntBASIC18.33■□□□□ 0.52
CLDN18P56856 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN18P56856 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN18P56856 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN18P56856 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN18P56856 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN18P56856 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN18P56856 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLDN18P56856 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms