Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CMC4P56277 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.29■□□□□ 0.04
CMC4P56277 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.29■□□□□ 0.04
CMC4P56277 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CMC4P56277 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.29■□□□□ 0.04
CMC4P56277 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.29■□□□□ 0.04
CMC4P56277 CROCCP5-201ENST00000436658 830 ntBASIC15.29■□□□□ 0.04
CMC4P56277 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CMC4P56277 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CMC4P56277 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.29■□□□□ 0.04
CMC4P56277 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CMC4P56277 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 MKRN4P-201ENST00000444706 1521 ntBASIC15.28■□□□□ 0.04
CMC4P56277 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 AL024507.2-201ENST00000606070 2574 ntBASIC15.28■□□□□ 0.04
CMC4P56277 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.28■□□□□ 0.04
CMC4P56277 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 AL589743.5-201ENST00000616611 1050 ntBASIC15.28■□□□□ 0.04
CMC4P56277 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.28■□□□□ 0.04
CMC4P56277 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.28■□□□□ 0.04
CMC4P56277 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.28■□□□□ 0.04
CMC4P56277 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.28■□□□□ 0.04
CMC4P56277 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.28■□□□□ 0.04
CMC4P56277 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CMC4P56277 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.27■□□□□ 0.04
CMC4P56277 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CMC4P56277 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CMC4P56277 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.27■□□□□ 0.04
CMC4P56277 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CMC4P56277 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CMC4P56277 KRT18P68-201ENST00000392293 1000 ntBASIC15.27■□□□□ 0.04
CMC4P56277 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.27■□□□□ 0.04
CMC4P56277 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.27■□□□□ 0.04
CMC4P56277 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.27■□□□□ 0.04
CMC4P56277 MIR4758-201ENST00000577688 71 ntBASIC15.27■□□□□ 0.04
CMC4P56277 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CMC4P56277 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CMC4P56277 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CMC4P56277 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CMC4P56277 AC016405.3-201ENST00000607710 860 ntBASIC15.27■□□□□ 0.04
CMC4P56277 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
CMC4P56277 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMC4P56277 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.27■□□□□ 0.03
CMC4P56277 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMC4P56277 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMC4P56277 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.27■□□□□ 0.03
CMC4P56277 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CMC4P56277 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 AC010980.2-201ENST00000587099 1412 ntBASIC15.26■□□□□ 0.03
CMC4P56277 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CMC4P56277 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
CMC4P56277 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CMC4P56277 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.26■□□□□ 0.03
CMC4P56277 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 LSM12P1-201ENST00000411836 588 ntBASIC15.26■□□□□ 0.03
CMC4P56277 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CMC4P56277 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.26■□□□□ 0.03
CMC4P56277 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.26■□□□□ 0.03
CMC4P56277 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CMC4P56277 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.26■□□□□ 0.03
CMC4P56277 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.26■□□□□ 0.03
CMC4P56277 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CMC4P56277 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms