Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.29■□□□□ 0.84
CDKN2DP55273 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.29■□□□□ 0.84
CDKN2DP55273 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.29■□□□□ 0.84
CDKN2DP55273 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDKN2DP55273 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CDKN2DP55273 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2DP55273 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKN2DP55273 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKN2DP55273 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKN2DP55273 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKN2DP55273 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.28■□□□□ 0.84
CDKN2DP55273 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKN2DP55273 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDKN2DP55273 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDKN2DP55273 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDKN2DP55273 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDKN2DP55273 AL162377.1-201ENST00000618844 1793 ntBASIC20.27■□□□□ 0.84
CDKN2DP55273 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.27■□□□□ 0.84
CDKN2DP55273 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDKN2DP55273 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.27■□□□□ 0.84
CDKN2DP55273 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.27■□□□□ 0.84
CDKN2DP55273 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.27■□□□□ 0.84
CDKN2DP55273 MIR2861-201ENST00000636310 90 ntBASIC20.27■□□□□ 0.84
CDKN2DP55273 MYCNOS-205ENST00000641950 531 ntBASIC20.27■□□□□ 0.84
CDKN2DP55273 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDKN2DP55273 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDKN2DP55273 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDKN2DP55273 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CDKN2DP55273 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDKN2DP55273 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKN2DP55273 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDKN2DP55273 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKN2DP55273 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDKN2DP55273 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.26■□□□□ 0.83
CDKN2DP55273 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.26■□□□□ 0.83
CDKN2DP55273 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.26■□□□□ 0.83
CDKN2DP55273 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CDKN2DP55273 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDKN2DP55273 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDKN2DP55273 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.25■□□□□ 0.83
CDKN2DP55273 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.25■□□□□ 0.83
CDKN2DP55273 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.25■□□□□ 0.83
CDKN2DP55273 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.25■□□□□ 0.83
CDKN2DP55273 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.25■□□□□ 0.83
CDKN2DP55273 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CDKN2DP55273 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDKN2DP55273 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDKN2DP55273 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKN2DP55273 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKN2DP55273 AC007322.3-201ENST00000426526 701 ntBASIC20.24■□□□□ 0.83
CDKN2DP55273 AC026271.2-201ENST00000428091 497 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms