Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.13■□□□□ 0.97
PMS2P54278 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.13■□□□□ 0.97
PMS2P54278 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.13■□□□□ 0.97
PMS2P54278 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.13■□□□□ 0.97
PMS2P54278 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.13■□□□□ 0.97
PMS2P54278 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.13■□□□□ 0.97
PMS2P54278 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PMS2P54278 BX005040.4-201ENST00000637145 1518 ntBASIC21.13■□□□□ 0.97
PMS2P54278 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
PMS2P54278 AC087289.5-201ENST00000586076 3175 ntBASIC21.13■□□□□ 0.97
PMS2P54278 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.13■□□□□ 0.97
PMS2P54278 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PMS2P54278 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PMS2P54278 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.12■□□□□ 0.97
PMS2P54278 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PMS2P54278 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS2P54278 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
PMS2P54278 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PMS2P54278 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PMS2P54278 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS2P54278 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS2P54278 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
PMS2P54278 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PMS2P54278 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.11■□□□□ 0.97
PMS2P54278 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.11■□□□□ 0.97
PMS2P54278 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.11■□□□□ 0.97
PMS2P54278 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS2P54278 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS2P54278 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PMS2P54278 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PMS2P54278 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS2P54278 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS2P54278 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS2P54278 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS2P54278 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS2P54278 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.1■□□□□ 0.97
PMS2P54278 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.1■□□□□ 0.97
PMS2P54278 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS2P54278 AC233992.3-201ENST00000607491 485 ntBASIC21.1■□□□□ 0.97
PMS2P54278 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PMS2P54278 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PMS2P54278 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 SMG8-203ENST00000578922 2178 ntBASIC21.09■□□□□ 0.97
PMS2P54278 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.09■□□□□ 0.97
PMS2P54278 BX842568.3-201ENST00000418104 571 ntBASIC21.09■□□□□ 0.97
PMS2P54278 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.09■□□□□ 0.97
PMS2P54278 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PMS2P54278 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PMS2P54278 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS2P54278 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PMS2P54278 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS2P54278 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms