Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.86■□□□□ 0.93
ATXN3P54252 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3P54252 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATXN3P54252 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.85■□□□□ 0.93
ATXN3P54252 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.85■□□□□ 0.93
ATXN3P54252 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN3P54252 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.85■□□□□ 0.93
ATXN3P54252 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.85■□□□□ 0.93
ATXN3P54252 MYC-209ENST00000641252 345 ntBASIC20.85■□□□□ 0.93
ATXN3P54252 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
ATXN3P54252 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATXN3P54252 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATXN3P54252 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ATXN3P54252 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATXN3P54252 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 UNC93B4-201ENST00000505679 747 ntBASIC20.84■□□□□ 0.93
ATXN3P54252 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.84■□□□□ 0.93
ATXN3P54252 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ATXN3P54252 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.84■□□□□ 0.93
ATXN3P54252 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 AP006587.3-201ENST00000525742 1516 ntBASIC20.83■□□□□ 0.93
ATXN3P54252 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ATXN3P54252 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3P54252 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 POU5F1P4-201ENST00000413175 1085 ntBASIC20.83■□□□□ 0.93
ATXN3P54252 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATXN3P54252 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.83■□□□□ 0.93
ATXN3P54252 AL591742.1-201ENST00000604433 565 ntBASIC20.83■□□□□ 0.93
ATXN3P54252 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN3P54252 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.83■□□□□ 0.92
ATXN3P54252 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
ATXN3P54252 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATXN3P54252 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN3P54252 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.82■□□□□ 0.92
ATXN3P54252 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 AL596275.1-201ENST00000423464 877 ntBASIC20.82■□□□□ 0.92
ATXN3P54252 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
ATXN3P54252 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.82■□□□□ 0.92
ATXN3P54252 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.82■□□□□ 0.92
ATXN3P54252 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
ATXN3P54252 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.82■□□□□ 0.92
ATXN3P54252 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
ATXN3P54252 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN3P54252 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATXN3P54252 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.82■□□□□ 0.92
ATXN3P54252 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATXN3P54252 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.81■□□□□ 0.92
ATXN3P54252 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATXN3P54252 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATXN3P54252 AL157384.1-201ENST00000445995 2473 ntBASIC20.81■□□□□ 0.92
ATXN3P54252 AC010980.2-201ENST00000587099 1412 ntBASIC20.81■□□□□ 0.92
ATXN3P54252 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATXN3P54252 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATXN3P54252 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATXN3P54252 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms