Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK1P53667 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.35■□□□□ 0.85
LIMK1P53667 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LIMK1P53667 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LIMK1P53667 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
LIMK1P53667 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
LIMK1P53667 AC061975.6-201ENST00000579045 1553 ntBASIC20.34■□□□□ 0.85
LIMK1P53667 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK1P53667 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.34■□□□□ 0.85
LIMK1P53667 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LIMK1P53667 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.34■□□□□ 0.85
LIMK1P53667 AL355075.4-201ENST00000554988 638 ntBASIC20.34■□□□□ 0.85
LIMK1P53667 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LIMK1P53667 RN7SL850P-201ENST00000579959 291 ntBASIC20.34■□□□□ 0.85
LIMK1P53667 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.34■□□□□ 0.85
LIMK1P53667 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.34■□□□□ 0.85
LIMK1P53667 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.34■□□□□ 0.85
LIMK1P53667 AL137060.1-201ENST00000618151 2648 ntBASIC20.34■□□□□ 0.85
LIMK1P53667 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LIMK1P53667 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK1P53667 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
LIMK1P53667 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK1P53667 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK1P53667 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.85
LIMK1P53667 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LIMK1P53667 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LIMK1P53667 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.33■□□□□ 0.85
LIMK1P53667 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIMK1P53667 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LIMK1P53667 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LIMK1P53667 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LIMK1P53667 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.33■□□□□ 0.84
LIMK1P53667 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.33■□□□□ 0.84
LIMK1P53667 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LIMK1P53667 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.32■□□□□ 0.84
LIMK1P53667 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.32■□□□□ 0.84
LIMK1P53667 AC110285.5-201ENST00000611501 352 ntBASIC20.32■□□□□ 0.84
LIMK1P53667 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.32■□□□□ 0.84
LIMK1P53667 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LIMK1P53667 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LIMK1P53667 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.31■□□□□ 0.84
LIMK1P53667 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LIMK1P53667 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 AC239809.2-201ENST00000415381 517 ntBASIC20.31■□□□□ 0.84
LIMK1P53667 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK1P53667 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.31■□□□□ 0.84
LIMK1P53667 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK1P53667 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.31■□□□□ 0.84
LIMK1P53667 RARRES2P10-201ENST00000564312 460 ntBASIC20.31■□□□□ 0.84
LIMK1P53667 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.31■□□□□ 0.84
LIMK1P53667 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LIMK1P53667 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LIMK1P53667 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LIMK1P53667 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
LIMK1P53667 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.3■□□□□ 0.84
LIMK1P53667 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.3■□□□□ 0.84
LIMK1P53667 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.3■□□□□ 0.84
LIMK1P53667 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.3■□□□□ 0.84
LIMK1P53667 AL049597.2-201ENST00000565575 961 ntBASIC20.3■□□□□ 0.84
LIMK1P53667 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms