Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
HMGA2P52926 AC106739.1-201ENST00000617035 715 ntBASIC18.74■□□□□ 0.59
HMGA2P52926 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HMGA2P52926 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGA2P52926 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HMGA2P52926 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
HMGA2P52926 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGA2P52926 AC125437.2-201ENST00000625180 2167 ntBASIC18.74■□□□□ 0.59
HMGA2P52926 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGA2P52926 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGA2P52926 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGA2P52926 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGA2P52926 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.73■□□□□ 0.59
HMGA2P52926 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGA2P52926 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.73■□□□□ 0.59
HMGA2P52926 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
HMGA2P52926 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGA2P52926 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGA2P52926 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGA2P52926 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HMGA2P52926 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.72■□□□□ 0.59
HMGA2P52926 PBX2P1-201ENST00000493219 1291 ntBASIC18.72■□□□□ 0.59
HMGA2P52926 AC138907.5-202ENST00000569484 235 ntBASIC18.72■□□□□ 0.59
HMGA2P52926 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGA2P52926 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGA2P52926 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HMGA2P52926 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGA2P52926 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
HMGA2P52926 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGA2P52926 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HMGA2P52926 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGA2P52926 AC116050.2-201ENST00000612102 1779 ntBASIC18.71■□□□□ 0.59
HMGA2P52926 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HMGA2P52926 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGA2P52926 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HMGA2P52926 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 MIR939-201ENST00000401314 82 ntBASIC18.71■□□□□ 0.59
HMGA2P52926 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.71■□□□□ 0.59
HMGA2P52926 AC245052.3-201ENST00000450182 901 ntBASIC18.71■□□□□ 0.59
HMGA2P52926 AL355001.2-201ENST00000620617 1191 ntBASIC18.71■□□□□ 0.59
HMGA2P52926 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGA2P52926 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGA2P52926 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HMGA2P52926 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGA2P52926 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.71■□□□□ 0.58
HMGA2P52926 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGA2P52926 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGA2P52926 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGA2P52926 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGA2P52926 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGA2P52926 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms