Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 DNAJC10-206ENST00000491074 3962 ntTSL 1 (best)10.33□□□□□ -0.768e-13■■■□□ 17.1
NCBP2P52298 VPS13B-206ENST00000496144 5625 ntTSL 57.84□□□□□ -1.152e-6■■■□□ 17.1
NCBP2P52298 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.42e-6■■■□□ 17.1
NCBP2P52298 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.482e-6■■■□□ 17.1
NCBP2P52298 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.88e-13■■■□□ 17.1
NCBP2P52298 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.631e-12■■■□□ 17.1
NCBP2P52298 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.358e-7■■■□□ 17.1
NCBP2P52298 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.15■■□□□ 1.148e-7■■■□□ 17.1
NCBP2P52298 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.138e-7■■■□□ 17.1
NCBP2P52298 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.117e-7■■■□□ 17.1
NCBP2P52298 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.987e-7■■■□□ 17.1
NCBP2P52298 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.738e-7■■■□□ 17.1
NCBP2P52298 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC11.7□□□□□ -0.542e-13■■■□□ 17
NCBP2P52298 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.792e-13■■■□□ 17
NCBP2P52298 WSB1-204ENST00000467843 4187 ntTSL 1 (best)8.54□□□□□ -1.042e-13■■■□□ 17
NCBP2P52298 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.855e-7■■■□□ 17
NCBP2P52298 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■■□□ 17
NCBP2P52298 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.22e-6■■■□□ 17
NCBP2P52298 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.7■□□□□ 0.12e-6■■■□□ 17
NCBP2P52298 LDAH-203ENST00000402479 493 ntTSL 313.02□□□□□ -0.337e-10■■■□□ 17
NCBP2P52298 LDAH-205ENST00000412261 566 ntTSL 412.96□□□□□ -0.337e-10■■■□□ 17
NCBP2P52298 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC11.25□□□□□ -0.617e-10■■■□□ 17
NCBP2P52298 LDAH-207ENST00000432947 548 ntTSL 411.15□□□□□ -0.627e-10■■■□□ 17
NCBP2P52298 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC11.15□□□□□ -0.627e-10■■■□□ 17
NCBP2P52298 LDAH-202ENST00000381090 2045 ntTSL 5 BASIC10.87□□□□□ -0.677e-10■■■□□ 17
NCBP2P52298 LDAH-206ENST00000419825 826 ntTSL 3 BASIC9.42□□□□□ -0.97e-10■■■□□ 17
NCBP2P52298 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.177e-10■■■□□ 17
NCBP2P52298 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.54□□□□□ -1.27e-10■■■□□ 17
NCBP2P52298 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.37□□□□□ -1.237e-10■■■□□ 17
NCBP2P52298 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.81□□□□□ -1.487e-10■■■□□ 17
NCBP2P52298 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.03□□□□□ -1.67e-10■■■□□ 17
NCBP2P52298 RAD17-214ENST00000511349 571 ntTSL 416.68■□□□□ 0.262e-8■■■□□ 17
NCBP2P52298 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.66□□□□□ -0.222e-8■■■□□ 17
NCBP2P52298 RAD17-209ENST00000504177 750 ntTSL 313.48□□□□□ -0.252e-8■■■□□ 17
NCBP2P52298 RAD17-211ENST00000507927 496 ntTSL 312.69□□□□□ -0.382e-8■■■□□ 17
NCBP2P52298 RAD17-217ENST00000514066 464 ntTSL 310.45□□□□□ -0.742e-8■■■□□ 17
NCBP2P52298 RAD17-204ENST00000354312 2943 ntTSL 1 (best) BASIC10□□□□□ -0.812e-8■■■□□ 17
NCBP2P52298 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.912e-8■■■□□ 17
NCBP2P52298 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC9.39□□□□□ -0.912e-8■■■□□ 17
NCBP2P52298 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.57□□□□□ -1.042e-8■■■□□ 17
NCBP2P52298 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.3□□□□□ -1.722e-8■■■□□ 17
NCBP2P52298 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.085e-15■■■□□ 17
NCBP2P52298 EEF1AKMT2-202ENST00000464099 1013 ntTSL 1 (best)23.61■■□□□ 1.374e-6■■■□□ 16.9
NCBP2P52298 BTBD3-207ENST00000449299 849 ntTSL 219.88■□□□□ 0.774e-6■■■□□ 16.9
NCBP2P52298 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.44e-6■■■□□ 16.9
NCBP2P52298 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.114e-6■■■□□ 16.9
NCBP2P52298 EEF1AKMT2-203ENST00000466270 3587 ntTSL 1 (best)14.03□□□□□ -0.164e-6■■■□□ 16.9
NCBP2P52298 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.44e-6■■■□□ 16.9
NCBP2P52298 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.474e-6■■■□□ 16.9
NCBP2P52298 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.74e-6■■■□□ 16.9
NCBP2P52298 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.311e-12■■■□□ 16.9
NCBP2P52298 PDK1-205ENST00000431718 728 ntTSL 319.15■□□□□ 0.661e-12■■■□□ 16.9
NCBP2P52298 SNRPB-203ENST00000474384 985 ntTSL 516.87■□□□□ 0.292e-11■■■□□ 16.9
NCBP2P52298 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.11e-12■■■□□ 16.9
NCBP2P52298 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.012e-11■■■□□ 16.9
NCBP2P52298 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.012e-11■■■□□ 16.9
NCBP2P52298 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.581e-12■■■□□ 16.9
NCBP2P52298 PDK1-208ENST00000443353 842 ntTSL 29.33□□□□□ -0.921e-12■■■□□ 16.9
NCBP2P52298 PDK1-206ENST00000436490 571 ntTSL 56.72□□□□□ -1.331e-12■■■□□ 16.9
NCBP2P52298 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.372e-11■■■□□ 16.9
NCBP2P52298 RRBP1-205ENST00000398782 1191 ntAPPRIS ALT2 TSL 222.23■■□□□ 1.159e-7■■■□□ 16.9
NCBP2P52298 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.01■■□□□ 1.119e-9■■■□□ 16.9
NCBP2P52298 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.979e-9■■■□□ 16.9
NCBP2P52298 ASF1B-203ENST00000589468 587 ntTSL 318.42■□□□□ 0.549e-9■■■□□ 16.9
NCBP2P52298 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.91■□□□□ 0.39e-9■■■□□ 16.9
NCBP2P52298 ZNF767P-204ENST00000486492 1616 ntTSL 215.85■□□□□ 0.139e-9■■■□□ 16.9
NCBP2P52298 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.089e-9■■■□□ 16.9
NCBP2P52298 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 09e-7■■■□□ 16.9
NCBP2P52298 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.03■□□□□ -09e-9■■■□□ 16.9
NCBP2P52298 ASF1B-204ENST00000590835 746 ntTSL 514.91□□□□□ -0.029e-9■■■□□ 16.9
NCBP2P52298 CEP152-209ENST00000560322 1947 ntAPPRIS ALT2 TSL 1 (best)13.53□□□□□ -0.249e-9■■■□□ 16.9
NCBP2P52298 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.37□□□□□ -0.279e-9■■■□□ 16.9
NCBP2P52298 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.329e-7■■■□□ 16.9
NCBP2P52298 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.57□□□□□ -0.49e-7■■■□□ 16.9
NCBP2P52298 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.699e-7■■■□□ 16.9
NCBP2P52298 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.939e-9■■■□□ 16.9
NCBP2P52298 CEP152-207ENST00000559444 594 ntTSL 27.24□□□□□ -1.259e-9■■■□□ 16.9
NCBP2P52298 CEP152-208ENST00000559630 253 ntTSL 26.74□□□□□ -1.339e-9■■■□□ 16.9
NCBP2P52298 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.379e-9■■■□□ 16.9
NCBP2P52298 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.769e-9■■■□□ 16.9
NCBP2P52298 PIGP-206ENST00000430792 803 ntTSL 523.66■■□□□ 1.381e-8■■■□□ 16.9
NCBP2P52298 AP000347.1-208ENST00000444220 618 ntTSL 420.78■□□□□ 0.921e-8■■■□□ 16.9
NCBP2P52298 GUSBP11-201ENST00000422506 2055 ntTSL 220.55■□□□□ 0.881e-8■■■□□ 16.9
NCBP2P52298 GUSBP11-205ENST00000452737 1662 ntTSL 1 (best)20.39■□□□□ 0.861e-8■■■□□ 16.9
NCBP2P52298 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.75■□□□□ 0.591e-8■■■□□ 16.9
NCBP2P52298 AP000347.1-207ENST00000432595 601 ntTSL 318.27■□□□□ 0.521e-8■■■□□ 16.9
NCBP2P52298 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.44■□□□□ 0.221e-8■■■□□ 16.9
NCBP2P52298 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.66■□□□□ 0.11e-8■■■□□ 16.9
NCBP2P52298 AP000347.1-202ENST00000435868 847 ntBASIC15.27■□□□□ 0.041e-8■■■□□ 16.9
NCBP2P52298 GUSBP11-204ENST00000451837 3234 ntTSL 1 (best)14.49□□□□□ -0.091e-8■■■□□ 16.9
NCBP2P52298 GUSBP11-203ENST00000445682 3350 ntTSL 212.36□□□□□ -0.431e-8■■■□□ 16.9
NCBP2P52298 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.061e-8■■■□□ 16.9
NCBP2P52298 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.241e-8■■■□□ 16.9
NCBP2P52298 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.082e-10■■■□□ 16.9
NCBP2P52298 TMEM161B-AS1-203ENST00000501869 684 ntTSL 1 (best)16.77■□□□□ 0.281e-8■■■□□ 16.9
NCBP2P52298 SS18-211ENST00000578954 756 ntTSL 315.14■□□□□ 0.011e-8■■■□□ 16.9
NCBP2P52298 SS18-226ENST00000585241 774 ntTSL 515.14■□□□□ 0.011e-8■■■□□ 16.9
NCBP2P52298 SS18-216ENST00000580751 547 ntTSL 414.43□□□□□ -0.11e-8■■■□□ 16.9
NCBP2P52298 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.37□□□□□ -0.111e-8■■■□□ 16.9
NCBP2P52298 TMEM161B-AS1-205ENST00000504769 548 ntTSL 414.37□□□□□ -0.111e-8■■■□□ 16.9
Retrieved 100 of 18,329 protein–RNA pairs in 355.2 ms