Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK9P50750 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK9P50750 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.68■□□□□ 0.74
CDK9P50750 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L2-201ENST00000561772 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK9P50750 CCDC92B-201ENST00000575506 885 ntBASIC19.68■□□□□ 0.74
CDK9P50750 AC053503.5-201ENST00000601508 636 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L6-201ENST00000626483 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L1-201ENST00000627662 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L8-201ENST00000629013 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L3-201ENST00000630187 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L7-201ENST00000630678 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 DUX4L5-201ENST00000630834 1275 ntBASIC19.68■□□□□ 0.74
CDK9P50750 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDK9P50750 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.68■□□□□ 0.74
CDK9P50750 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.68■□□□□ 0.74
CDK9P50750 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CDK9P50750 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDK9P50750 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDK9P50750 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDK9P50750 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 AC079140.4-201ENST00000507448 529 ntBASIC19.67■□□□□ 0.74
CDK9P50750 TERF1P2-201ENST00000583350 1212 ntBASIC19.67■□□□□ 0.74
CDK9P50750 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDK9P50750 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDK9P50750 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.66■□□□□ 0.74
CDK9P50750 AFG3L1P-217ENST00000557444 2447 ntBASIC19.66■□□□□ 0.74
CDK9P50750 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDK9P50750 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK9P50750 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK9P50750 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDK9P50750 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.66■□□□□ 0.74
CDK9P50750 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK9P50750 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.66■□□□□ 0.74
CDK9P50750 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CDK9P50750 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDK9P50750 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.66■□□□□ 0.74
CDK9P50750 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDK9P50750 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CDK9P50750 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK9P50750 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK9P50750 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.65■□□□□ 0.74
CDK9P50750 KRT18P14-201ENST00000534205 1250 ntBASIC19.65■□□□□ 0.74
CDK9P50750 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK9P50750 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDK9P50750 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK9P50750 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK9P50750 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK9P50750 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDK9P50750 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDK9P50750 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.64■□□□□ 0.74
CDK9P50750 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CDK9P50750 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDK9P50750 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK9P50750 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDK9P50750 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK9P50750 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
CDK9P50750 KRT87P-202ENST00000534226 1464 ntBASIC19.64■□□□□ 0.73
CDK9P50750 AC061975.6-201ENST00000579045 1553 ntBASIC19.64■□□□□ 0.73
CDK9P50750 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK9P50750 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms