Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.57■□□□□ 0.88
ARCN1P48444 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ARCN1P48444 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
ARCN1P48444 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARCN1P48444 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.56■□□□□ 0.88
ARCN1P48444 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.56■□□□□ 0.88
ARCN1P48444 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.56■□□□□ 0.88
ARCN1P48444 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ARCN1P48444 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.56■□□□□ 0.88
ARCN1P48444 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.56■□□□□ 0.88
ARCN1P48444 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.56■□□□□ 0.88
ARCN1P48444 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARCN1P48444 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ARCN1P48444 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.55■□□□□ 0.88
ARCN1P48444 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.55■□□□□ 0.88
ARCN1P48444 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.55■□□□□ 0.88
ARCN1P48444 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.55■□□□□ 0.88
ARCN1P48444 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.55■□□□□ 0.88
ARCN1P48444 UBE2DNL-204ENST00000602536 740 ntBASIC20.55■□□□□ 0.88
ARCN1P48444 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.55■□□□□ 0.88
ARCN1P48444 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.55■□□□□ 0.88
ARCN1P48444 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARCN1P48444 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.54■□□□□ 0.88
ARCN1P48444 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.54■□□□□ 0.88
ARCN1P48444 AC006015.1-201ENST00000429970 570 ntBASIC20.54■□□□□ 0.88
ARCN1P48444 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.54■□□□□ 0.88
ARCN1P48444 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.54■□□□□ 0.88
ARCN1P48444 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.54■□□□□ 0.88
ARCN1P48444 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.54■□□□□ 0.88
ARCN1P48444 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.54■□□□□ 0.88
ARCN1P48444 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.54■□□□□ 0.88
ARCN1P48444 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ARCN1P48444 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARCN1P48444 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ARCN1P48444 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
ARCN1P48444 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 AC090192.1-201ENST00000517740 490 ntBASIC20.53■□□□□ 0.88
ARCN1P48444 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ARCN1P48444 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 AL162377.1-201ENST00000618844 1793 ntBASIC20.53■□□□□ 0.88
ARCN1P48444 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARCN1P48444 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
ARCN1P48444 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.53■□□□□ 0.88
ARCN1P48444 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.52■□□□□ 0.88
ARCN1P48444 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARCN1P48444 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ARCN1P48444 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ARCN1P48444 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
ARCN1P48444 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
ARCN1P48444 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARCN1P48444 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms