Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
GABRA4P48169 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.51■□□□□ 0.71
GABRA4P48169 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.51■□□□□ 0.71
GABRA4P48169 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GABRA4P48169 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 AC027702.1-201ENST00000563810 1770 ntBASIC19.51■□□□□ 0.71
GABRA4P48169 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.51■□□□□ 0.71
GABRA4P48169 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GABRA4P48169 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
GABRA4P48169 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
GABRA4P48169 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.5■□□□□ 0.71
GABRA4P48169 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.5■□□□□ 0.71
GABRA4P48169 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.5■□□□□ 0.71
GABRA4P48169 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.5■□□□□ 0.71
GABRA4P48169 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.5■□□□□ 0.71
GABRA4P48169 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GABRA4P48169 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.5■□□□□ 0.71
GABRA4P48169 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
GABRA4P48169 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
GABRA4P48169 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
GABRA4P48169 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.49■□□□□ 0.71
GABRA4P48169 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
GABRA4P48169 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
GABRA4P48169 AL356652.1-201ENST00000615962 565 ntBASIC19.49■□□□□ 0.71
GABRA4P48169 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.49■□□□□ 0.71
GABRA4P48169 AF106564.1-201ENST00000607058 2553 ntBASIC19.49■□□□□ 0.71
GABRA4P48169 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GABRA4P48169 AC121338.2-201ENST00000622535 1744 ntBASIC19.48■□□□□ 0.71
GABRA4P48169 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.48■□□□□ 0.71
GABRA4P48169 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.48■□□□□ 0.71
GABRA4P48169 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
GABRA4P48169 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
GABRA4P48169 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GABRA4P48169 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
GABRA4P48169 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
GABRA4P48169 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.47■□□□□ 0.71
GABRA4P48169 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
GABRA4P48169 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.47■□□□□ 0.71
GABRA4P48169 PGM5P4-201ENST00000421970 445 ntBASIC19.47■□□□□ 0.71
GABRA4P48169 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
GABRA4P48169 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.47■□□□□ 0.71
GABRA4P48169 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.47■□□□□ 0.71
GABRA4P48169 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.47■□□□□ 0.71
GABRA4P48169 HLA-B-256ENST00000639848 1089 ntBASIC19.47■□□□□ 0.71
GABRA4P48169 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
GABRA4P48169 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
GABRA4P48169 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GABRA4P48169 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.46■□□□□ 0.71
GABRA4P48169 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.46■□□□□ 0.71
GABRA4P48169 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.46■□□□□ 0.71
GABRA4P48169 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms