Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
MMP13P45452 SLC7A5P2-201ENST00000553010 536 ntBASIC21.31■■□□□ 1
MMP13P45452 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.31■■□□□ 1
MMP13P45452 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MMP13P45452 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
MMP13P45452 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.31■■□□□ 1
MMP13P45452 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MMP13P45452 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP13P45452 AC006128.1-201ENST00000624704 1661 ntBASIC21.31■■□□□ 1
MMP13P45452 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.31■■□□□ 1
MMP13P45452 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
MMP13P45452 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.3■■□□□ 1
MMP13P45452 KRT16P2-201ENST00000414673 1423 ntBASIC21.3■■□□□ 1
MMP13P45452 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.3■■□□□ 1
MMP13P45452 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
MMP13P45452 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.3■■□□□ 1
MMP13P45452 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.3■■□□□ 1
MMP13P45452 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
MMP13P45452 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.3■■□□□ 1
MMP13P45452 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP13P45452 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MMP13P45452 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.29■■□□□ 1
MMP13P45452 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.29■■□□□ 1
MMP13P45452 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.29■■□□□ 1
MMP13P45452 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.29■■□□□ 1
MMP13P45452 AC137761.2-201ENST00000561729 223 ntBASIC21.29■■□□□ 1
MMP13P45452 AC145350.3-201ENST00000569033 163 ntBASIC21.29■■□□□ 1
MMP13P45452 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.29■■□□□ 1
MMP13P45452 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP13P45452 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP13P45452 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.29■■□□□ 1
MMP13P45452 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.29■■□□□ 1
MMP13P45452 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.29■■□□□ 1
MMP13P45452 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MMP13P45452 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.28■■□□□ 1
MMP13P45452 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
MMP13P45452 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.28■■□□□ 1
MMP13P45452 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.28■■□□□ 1
MMP13P45452 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP13P45452 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.28■■□□□ 1
MMP13P45452 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.28■■□□□ 1
MMP13P45452 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.28■■□□□ 1
MMP13P45452 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP13P45452 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.27■■□□□ 1
MMP13P45452 UBE2DNL-204ENST00000602536 740 ntBASIC21.27■■□□□ 1
MMP13P45452 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.27■■□□□ 1
MMP13P45452 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP13P45452 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
MMP13P45452 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.27■□□□□ 0.99
MMP13P45452 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MMP13P45452 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
MMP13P45452 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP13P45452 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP13P45452 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP13P45452 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.26■□□□□ 0.99
MMP13P45452 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms