Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTSKP43235 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTSKP43235 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTSKP43235 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTSKP43235 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.41■□□□□ 0.86
CTSKP43235 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.41■□□□□ 0.86
CTSKP43235 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 UBE2SP1-201ENST00000450587 669 ntBASIC20.41■□□□□ 0.86
CTSKP43235 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 AC008550.1-201ENST00000511500 884 ntBASIC20.41■□□□□ 0.86
CTSKP43235 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.41■□□□□ 0.86
CTSKP43235 PNMA6B-201ENST00000538162 1200 ntBASIC20.41■□□□□ 0.86
CTSKP43235 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.41■□□□□ 0.86
CTSKP43235 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.41■□□□□ 0.86
CTSKP43235 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CTSKP43235 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.41■□□□□ 0.86
CTSKP43235 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 AC010542.4-201ENST00000563151 1910 ntBASIC20.41■□□□□ 0.86
CTSKP43235 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 AC080038.3-201ENST00000623346 1952 ntBASIC20.41■□□□□ 0.86
CTSKP43235 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.41■□□□□ 0.86
CTSKP43235 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSKP43235 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.4■□□□□ 0.86
CTSKP43235 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTSKP43235 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.4■□□□□ 0.86
CTSKP43235 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CTSKP43235 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTSKP43235 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTSKP43235 AC007322.3-201ENST00000426526 701 ntBASIC20.4■□□□□ 0.86
CTSKP43235 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.4■□□□□ 0.86
CTSKP43235 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTSKP43235 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CTSKP43235 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CTSKP43235 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.4■□□□□ 0.86
CTSKP43235 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CTSKP43235 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.4■□□□□ 0.86
CTSKP43235 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.4■□□□□ 0.86
CTSKP43235 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTSKP43235 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.39■□□□□ 0.86
CTSKP43235 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTSKP43235 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CTSKP43235 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
CTSKP43235 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CTSKP43235 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.39■□□□□ 0.85
CTSKP43235 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CTSKP43235 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.39■□□□□ 0.85
CTSKP43235 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CTSKP43235 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.39■□□□□ 0.85
CTSKP43235 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTSKP43235 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.38■□□□□ 0.85
CTSKP43235 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.38■□□□□ 0.85
CTSKP43235 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.38■□□□□ 0.85
CTSKP43235 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
CTSKP43235 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.38■□□□□ 0.85
CTSKP43235 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.38■□□□□ 0.85
CTSKP43235 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.38■□□□□ 0.85
CTSKP43235 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSKP43235 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CTSKP43235 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms