Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AL049796.1-201ENST00000565336 1766 ntBASIC21.67■■□□□ 1.06
GRIK1P39086 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIK1P39086 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.67■■□□□ 1.06
GRIK1P39086 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIK1P39086 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.67■■□□□ 1.06
GRIK1P39086 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
GRIK1P39086 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.67■■□□□ 1.06
GRIK1P39086 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIK1P39086 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIK1P39086 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIK1P39086 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.66■■□□□ 1.06
GRIK1P39086 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
GRIK1P39086 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.66■■□□□ 1.06
GRIK1P39086 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIK1P39086 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.66■■□□□ 1.06
GRIK1P39086 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.66■■□□□ 1.06
GRIK1P39086 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.66■■□□□ 1.06
GRIK1P39086 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GRIK1P39086 AC011484.1-201ENST00000377652 1995 ntBASIC21.66■■□□□ 1.06
GRIK1P39086 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
GRIK1P39086 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 FEM1AP4-201ENST00000443167 1987 ntBASIC21.65■■□□□ 1.06
GRIK1P39086 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
GRIK1P39086 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 TSPY20P-201ENST00000450910 630 ntBASIC21.65■■□□□ 1.06
GRIK1P39086 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.65■■□□□ 1.06
GRIK1P39086 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GRIK1P39086 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GRIK1P39086 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GRIK1P39086 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIK1P39086 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIK1P39086 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIK1P39086 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
GRIK1P39086 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.64■■□□□ 1.05
GRIK1P39086 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIK1P39086 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.64■■□□□ 1.05
GRIK1P39086 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.64■■□□□ 1.05
GRIK1P39086 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.64■■□□□ 1.05
GRIK1P39086 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GRIK1P39086 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
GRIK1P39086 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
GRIK1P39086 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
GRIK1P39086 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.63■■□□□ 1.05
GRIK1P39086 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.63■■□□□ 1.05
GRIK1P39086 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.63■■□□□ 1.05
GRIK1P39086 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.63■■□□□ 1.05
GRIK1P39086 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.63■■□□□ 1.05
GRIK1P39086 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.63■■□□□ 1.05
GRIK1P39086 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
GRIK1P39086 MIR4651-201ENST00000582622 73 ntBASIC21.63■■□□□ 1.05
GRIK1P39086 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GRIK1P39086 CLDN5-201ENST00000403084 2357 ntBASIC21.63■■□□□ 1.05
GRIK1P39086 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
GRIK1P39086 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
GRIK1P39086 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
GRIK1P39086 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 ABHD17AP1-201ENST00000358206 933 ntBASIC21.62■■□□□ 1.05
GRIK1P39086 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.62■■□□□ 1.05
GRIK1P39086 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.62■■□□□ 1.05
GRIK1P39086 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.62■■□□□ 1.05
GRIK1P39086 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIK1P39086 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms