Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 MTC3YGL226W 372 nt3.21□□□□□ -1.9
TDP1P38319 YHR214W-AYHR214W-A 486 nt3.21□□□□□ -1.9
TDP1P38319 tW(UCA)QtW(UCA)Q 74 nt3.21□□□□□ -1.9
TDP1P38319 YIR040CYIR040C 333 nt3.21□□□□□ -1.9
TDP1P38319 YJL202CYJL202C 348 nt3.21□□□□□ -1.9
TDP1P38319 YAR068WYAR068W 486 nt3.21□□□□□ -1.9
TDP1P38319 YMR046W-AYMR046W-A 129 nt3.21□□□□□ -1.9
TDP1P38319 GOT1YMR292W 417 nt3.21□□□□□ -1.9
TDP1P38319 YNL179CYNL179C 438 nt3.21□□□□□ -1.9
TDP1P38319 MNT3YIL014W 1893 nt3.21□□□□□ -1.9
TDP1P38319 BNI4YNL233W 2679 nt3.21□□□□□ -1.9
TDP1P38319 YDL180WYDL180W 1644 nt3.2□□□□□ -1.9
TDP1P38319 RAD2YGR258C 3096 nt3.2□□□□□ -1.9
TDP1P38319 YLR302CYLR302C 363 nt3.2□□□□□ -1.9
TDP1P38319 HCH1YNL281W 462 nt3.2□□□□□ -1.9
TDP1P38319 REC8YPR007C 2043 nt3.2□□□□□ -1.9
TDP1P38319 GIS4YML006C 2325 nt3.2□□□□□ -1.9
TDP1P38319 SPO71YDR104C 3738 nt3.2□□□□□ -1.9
TDP1P38319 PDS5YMR076C 3834 nt3.2□□□□□ -1.9
TDP1P38319 FAR1YJL157C 2493 nt3.19□□□□□ -1.9
TDP1P38319 MYO5YMR109W 3660 nt3.19□□□□□ -1.9
TDP1P38319 YGR069WYGR069W 336 nt3.19□□□□□ -1.9
TDP1P38319 SRL3YKR091W 741 nt3.19□□□□□ -1.9
TDP1P38319 FCF2YLR051C 654 nt3.19□□□□□ -1.9
TDP1P38319 OST6YML019W 999 nt3.19□□□□□ -1.9
TDP1P38319 YBL065WYBL065W 345 nt3.19□□□□□ -1.9
TDP1P38319 YOL085W-AYOL085W-A 213 nt3.19□□□□□ -1.9
TDP1P38319 HSP10YOR020C 321 nt3.19□□□□□ -1.9
TDP1P38319 DGK1YOR311C 873 nt3.19□□□□□ -1.9
TDP1P38319 YPR099CYPR099C 357 nt3.19□□□□□ -1.9
TDP1P38319 LRG1YDL240W 3054 nt3.19□□□□□ -1.9
TDP1P38319 YMR317WYMR317W 3423 nt3.19□□□□□ -1.9
TDP1P38319 LYS9YNR050C 1341 nt3.19□□□□□ -1.9
TDP1P38319 VPS3YDR495C 3036 nt3.18□□□□□ -1.9
TDP1P38319 YSP2YDR326C 4317 nt3.18□□□□□ -1.9
TDP1P38319 GPI13YLL031C 3054 nt3.18□□□□□ -1.9
TDP1P38319 CYC7YEL039C 342 nt3.18□□□□□ -1.9
TDP1P38319 CAJ1YER048C 1176 nt3.18□□□□□ -1.9
TDP1P38319 PET191YJR034W 327 nt3.18□□□□□ -1.9
TDP1P38319 YEL1YBL060W 2064 nt3.18□□□□□ -1.9
TDP1P38319 VPS53YJL029C 2469 nt3.17□□□□□ -1.9
TDP1P38319 YCR081C-AYCR081C-A 237 nt3.17□□□□□ -1.9
TDP1P38319 snR80snR80 171 nt3.17□□□□□ -1.9
TDP1P38319 YDL242WYDL242W 354 nt3.17□□□□□ -1.9
TDP1P38319 YDR406W-AYDR406W-A 246 nt3.17□□□□□ -1.9
TDP1P38319 RRT13YER066W 558 nt3.17□□□□□ -1.9
TDP1P38319 MSL1YIR009W 336 nt3.17□□□□□ -1.9
TDP1P38319 SSN8YNL025C 972 nt3.17□□□□□ -1.9
TDP1P38319 TCP1YDR212W 1680 nt3.17□□□□□ -1.9
TDP1P38319 SRB4YER022W 2064 nt3.16□□□□□ -1.9
TDP1P38319 STN1YDR082W 1485 nt3.16□□□□□ -1.9
TDP1P38319 KHA1YJL094C 2622 nt3.16□□□□□ -1.9
TDP1P38319 MDV1YJL112W 2145 nt3.16□□□□□ -1.9
TDP1P38319 SPC72YAL047C 1869 nt3.16□□□□□ -1.9
TDP1P38319 SPP382YLR424W 2127 nt3.16□□□□□ -1.9
TDP1P38319 ATP17YDR377W 306 nt3.16□□□□□ -1.9
TDP1P38319 YER076W-AYER076W-A 348 nt3.16□□□□□ -1.9
TDP1P38319 YER091C-AYER091C-A 222 nt3.16□□□□□ -1.9
TDP1P38319 FMP32YFL046W 624 nt3.16□□□□□ -1.9
TDP1P38319 YFL063WYFL063W 456 nt3.16□□□□□ -1.9
TDP1P38319 YIL012WYIL012W 342 nt3.16□□□□□ -1.9
TDP1P38319 RPS7BYNL096C 573 nt3.16□□□□□ -1.9
TDP1P38319 RPL23AYBL087C 414 nt3.16□□□□□ -1.9
TDP1P38319 YPL039WYPL039W 951 nt3.16□□□□□ -1.9
TDP1P38319 MSR1YHR091C 1932 nt3.16□□□□□ -1.9
TDP1P38319 LCB4YOR171C 1875 nt3.16□□□□□ -1.9
TDP1P38319 URB2YJR041C 3525 nt3.15□□□□□ -1.9
TDP1P38319 NOT5YPR072W 1683 nt3.15□□□□□ -1.9
TDP1P38319 YER079C-AYER079C-A 339 nt3.15□□□□□ -1.91
TDP1P38319 PGA1YNL158W 597 nt3.15□□□□□ -1.91
TDP1P38319 YPL080CYPL080C 327 nt3.15□□□□□ -1.91
TDP1P38319 STT4YLR305C 5703 nt3.15□□□□□ -1.91
TDP1P38319 NDD1YOR372C 1665 nt3.14□□□□□ -1.91
TDP1P38319 ARO1YDR127W 4767 nt3.14□□□□□ -1.91
TDP1P38319 YGL188C-AYGL188C-A 141 nt3.14□□□□□ -1.91
TDP1P38319 YOL160WYOL160W 342 nt3.14□□□□□ -1.91
TDP1P38319 TAO3YIL129C 7131 nt3.14□□□□□ -1.91
TDP1P38319 YBP1YBR216C 2025 nt3.14□□□□□ -1.91
TDP1P38319 JJJ2YJL162C 1752 nt3.13□□□□□ -1.91
TDP1P38319 YER066C-AYER066C-A 501 nt3.13□□□□□ -1.91
TDP1P38319 NOP19YGR251W 591 nt3.13□□□□□ -1.91
TDP1P38319 YPL238CYPL238C 390 nt3.13□□□□□ -1.91
TDP1P38319 SLM6YBR266C 453 nt3.13□□□□□ -1.91
TDP1P38319 PBS2YJL128C 2007 nt3.13□□□□□ -1.91
TDP1P38319 EMP70YLR083C 2004 nt3.13□□□□□ -1.91
TDP1P38319 SHQ1YIL104C 1524 nt3.13□□□□□ -1.91
TDP1P38319 YEL018C-AYEL018C-A 534 nt3.12□□□□□ -1.91
TDP1P38319 HMF1YER057C 390 nt3.12□□□□□ -1.91
TDP1P38319 AST2YER101C 1293 nt3.12□□□□□ -1.91
TDP1P38319 RPS26BYER131W 360 nt3.12□□□□□ -1.91
TDP1P38319 YKL222CYKL222C 2118 nt3.12□□□□□ -1.91
TDP1P38319 YBL008W-AYBL008W-A 240 nt3.12□□□□□ -1.91
TDP1P38319 PRE8YML092C 753 nt3.12□□□□□ -1.91
TDP1P38319 LSM2YBL026W 288 nt3.12□□□□□ -1.91
TDP1P38319 SSP1YHR184W 1716 nt3.12□□□□□ -1.91
TDP1P38319 RRM3YHR031C 2172 nt3.12□□□□□ -1.91
TDP1P38319 SNQ2YDR011W 4506 nt3.11□□□□□ -1.91
TDP1P38319 CSR2YPR030W 3366 nt3.11□□□□□ -1.91
TDP1P38319 YER023C-AYER023C-A 213 nt3.11□□□□□ -1.91
TDP1P38319 ERG28YER044C 447 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms